LOC122343176


Basic Information

Item Value
gene id LOC122343176
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20187984 ~ 20189971 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250696.1
CATAACGCTGCGCCTCCGCGTCTGCGACTCGGCTGAAGGAAAGGAAAGATCGTCTGAGATCCGTGttataaaaatggcttttattaaagaggagaccGAAGACGTGATCGTAGAAACGTCGAGAGTCAAGCATGAAGATACCGAGGAACAAACGGACTCGAGGCTGCTGAAAAAGGAGAGTCAAAAACTGACTGAAACAACAGATAAAGTTCAGTACGAAAAACGTGATTTCATAACCGGAGAGAAGTTTAGTTGCTCACAGGCTAAAAAGACCACTCGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250696.1 True 282 lncRNA 0.46 3 20187984 20189971

Neighbor

gene id symbol gene type direction distance location
LOC122342265 NA coding upstream 3486 20183653 ~ 20184498 (+)
trnam-cau_25 NA coding upstream 80857 20107054 ~ 20107127 (+)
trnam-cau_24 NA coding upstream 81629 20106282 ~ 20106355 (+)
trnam-cau_23 NA coding upstream 83533 20104376 ~ 20104451 (+)
trnam-cau_22 NA coding upstream 85440 20102471 ~ 20102544 (+)
LOC122343930 NA coding downstream 58140 20248111 ~ 20248229 (+)
LOC122343026 NA coding downstream 186439 20376410 ~ 20378106 (+)
LOC122343110 NA coding downstream 201494 20391465 ~ 20392374 (+)
LOC122342274 NA coding downstream 253375 20443346 ~ 20446136 (+)
LOC122342275 NA coding downstream 278255 20468226 ~ 20469061 (+)
G29857 NA non-coding upstream 30461 20001067 ~ 20157523 (+)
G29854 NA non-coding upstream 205090 19981924 ~ 19982894 (+)
G29852 NA non-coding upstream 207261 19980489 ~ 19980723 (+)
G29850 NA non-coding upstream 209358 19978320 ~ 19978626 (+)
G29844 NA non-coding upstream 317069 19870420 ~ 19870915 (+)
G29883 LOC107723241,LOC107659605,LOC107550566 non-coding downstream 76865 20266836 ~ 20270112 (+)
G29918 NA non-coding downstream 133709 20323680 ~ 20442006 (+)
LOC122343173 NA non-coding downstream 247694 20437665 ~ 20438508 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding downstream 250577 20440548 ~ 20443225 (+)
LOC122343178 NA non-coding downstream 269399 20459370 ~ 20462342 (+)
LOC122343063 NA other upstream 144531 20037933 ~ 20043453 (+)
G29835 NA other upstream 401856 19731262 ~ 19786128 (+)
LOC122343071 NA other upstream 437910 19745734 ~ 19750074 (+)
G29814 LOC107660256 other upstream 845073 19290220 ~ 19342911 (+)
G29642 NA other upstream 1301582 18883179 ~ 18886402 (+)
LOC122342270 NA other downstream 154375 20344346 ~ 20346724 (+)
G29921 NA other downstream 177704 20367675 ~ 20368816 (+)
G29961 NA other downstream 506701 20696672 ~ 20706846 (+)
G30058 NA other downstream 928591 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 979222 21169193 ~ 21174340 (+)

Expression


Co-expression Network