LOC122343178


Basic Information

Item Value
gene id LOC122343178
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 20459370 ~ 20462342 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250698.1
CCAAGCTCATTTGACACAGAATTTGTATCGGCTTACCCCAAACGCAACTTCAGAGTGAAGCACGAAAACCCAGCTGAAAAGAGGTCGGTTTCAGGATCCTGGAACGAGAATGTCGACTCCTATACCCATTTGTCATCCAGCTGCAACAACCAGtacaaacaacagcaacagctGAGGTTACCACAAATGCTCCAGTGCCTGTCTTTCTCCAACAGATAAAAGGGCTTTCATTTCTTCATGGACTTAAGGCATTTCTAGAAGGCCAACCAAAGGCCCTTGGGACAGTCCAGATAATGATCGGTGTGATGACTTTCCTGTTTGGCATTGTGTCTACAGTTCATGCAGAATCCGTCTTTGTCTTTATTGGTTTACCGTACTGGGGATCTATCACTGTAAGAAACTGTACAGTTTATTGTTCCGTTTTTTATAATACAAGCTGCGGTAGTTAGTCAATCAAAAATGCCTATTAACGCCATGTGTACCTCCATTGCAAG
>XR_006250699.1
CCAAGCTCATTTGACACAGAATTTGTATCGGCTTACCCCAAACGCAACTTCAGAGTGAAGCACGAAAACCCAGCTGAAAAGAGGTCGGTTTCAGGATCCTGGAACGAGAATGTCGACTCCTATACCCATTTGTCATCCAGCTGCAACAACCAGtacaaacaacagcaacagctGAGGTTACCACAAATGCTCCAGTGCCTGTCTTTCTCCAACAGATAAAAGGGCTTTCATTTCTTCATGGACTTAAGGCATTTCTAGAAGGCCAACCAAAGGCCCTTGGGACAGTCCAGATAATGATCGGTGTGATGACTTTCCTGTTTGGCATTGTGTCTACAGTTCATGCAGAATCCGTCTTTGTCTTTATTGGTTTACCGTACTGGGGATCTATCACTATGCCAGTGGTCCGCAGCTCTTCTGTGAACCACCAAGAACCCGAATACTGTAattgtgaataaatatgaattattaaaaatgttggaACTTTTGTGAGACACACGGATTTCCCAATAATTTCCTGTCCATTATCTGATAATTATGTcaaaaactattcaaaactAGATGAGATGTTATTTTATGAAGTTCAAGTTTCAAGAAAGTTACATGCCaattataaacatgtttattgtaATAAGGTATTATAAAATGAGTATTGTTAAAAGATTCTCCATTGTCTGTAATTTGGCTGAAGAAATGTGTgagtttataataatttaaattgttaaaacaaCCTATTCAGGCAATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250698.1 False 494 lncRNA 0.44 3 20459370 20460194
XR_006250699.1 True 743 lncRNA 0.38 4 20459370 20462342

Neighbor

gene id symbol gene type direction distance location
LOC122342274 NA coding upstream 13234 20443346 ~ 20446136 (+)
LOC122343110 NA coding upstream 66996 20391465 ~ 20392374 (+)
LOC122343026 NA coding upstream 81264 20376410 ~ 20378106 (+)
LOC122343930 NA coding upstream 211141 20248111 ~ 20248229 (+)
LOC122342265 NA coding upstream 274872 20183653 ~ 20184498 (+)
LOC122342275 NA coding downstream 5884 20468226 ~ 20469061 (+)
LOC122343122 NA coding downstream 8328 20470670 ~ 20476708 (+)
LOC122342276 NA coding downstream 43069 20505411 ~ 20515629 (+)
LOC122343005 NA coding downstream 80790 20543132 ~ 20559014 (+)
LOC122342277 LOC107741474 coding downstream 171542 20633884 ~ 20638611 (+)
LOC122343162 LOC107575631,LOC107741456,LOC107667978,LOC107575420,LOC107741609,LOC107727338,LOC107575457,LOC107566978 non-coding upstream 16145 20440548 ~ 20443225 (+)
G29918 NA non-coding upstream 17364 20323680 ~ 20442006 (+)
LOC122343173 NA non-coding upstream 20862 20437665 ~ 20438508 (+)
G29883 LOC107723241,LOC107659605,LOC107550566 non-coding upstream 189258 20266836 ~ 20270112 (+)
LOC122343176 NA non-coding upstream 269399 20187984 ~ 20189971 (+)
G29927 LOC107681551 non-coding downstream 34755 20497097 ~ 20497868 (+)
G29945 NA non-coding downstream 168478 20630820 ~ 20631329 (+)
G29947 LOC107709565,LOC107727338,LOC107575420,LOC107569100 non-coding downstream 182915 20645257 ~ 20645535 (+)
G30005 NA non-coding downstream 322967 20785309 ~ 20785530 (+)
G30003 NA non-coding downstream 418107 20880449 ~ 20882908 (+)
G29921 NA other upstream 90554 20367675 ~ 20368816 (+)
LOC122342270 NA other upstream 112646 20344346 ~ 20346724 (+)
LOC122343063 NA other upstream 415917 20037933 ~ 20043453 (+)
G29835 NA other upstream 673242 19731262 ~ 19786128 (+)
G29961 NA other downstream 234330 20696672 ~ 20706846 (+)
G30058 NA other downstream 656220 21118562 ~ 21142831 (+)
LOC122342286 LOC107578117 other downstream 706851 21169193 ~ 21174340 (+)
LOC122342301 LOC107563870,LOC107718524,LOC107683800,LOC107564010,LOC107563545 other downstream 906301 21368643 ~ 21761181 (+)
G30119 NA other downstream 925851 21388193 ~ 21630120 (+)

Expression


Co-expression Network