LOC122343180


Basic Information

Item Value
gene id LOC122343180
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24313790 ~ 24314321 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250702.1
CAGGAGGACGACAGCCAGCTcagcgaggaggaggaggagcagacGGTGTGTGAGCTCTGCTCtgacgagtgtgtgtgtttcagtcagGACAGACGCAGACAGAAGAGGATGGTCCTGTCCAGTGAAGAGGAGTCTGAGGAGTCCAgcagacacagacagaagaagaagaagcgaTCACAGgaGTGTGTCCAGTGAGTCTGATGATCTCAGCTCGTCTCCAGCTTCACAGACACACCACCGACACAGCTCTCCGTCCGGAGGAACTCACAGCaggaagtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagggactGAGACTGagactctctgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250702.1 True 359 lncRNA 0.55 3 24313790 24314321

Neighbor

gene id symbol gene type direction distance location
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding downstream 47183 24265349 ~ 24266607 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding downstream 93782 24207655 ~ 24220008 (-)
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 384256 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 585872 23725752 ~ 23727918 (-)
LOC122343073 NA coding downstream 1054471 23256365 ~ 23259319 (-)
ckap4 NA coding upstream 162675 24476996 ~ 24479914 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 171041 24485362 ~ 24492499 (-)
LOC122342346 LOC107581033 coding upstream 227817 24542138 ~ 24544170 (-)
LOC122342998 NA coding upstream 243811 24558132 ~ 24564000 (-)
LOC122342983 NA coding upstream 268646 24582967 ~ 24593953 (-)
G31127 NA non-coding downstream 1498 24305255 ~ 24312292 (-)
LOC122343167 NA non-coding downstream 98218 24212067 ~ 24215572 (-)
G31088 NA non-coding downstream 185882 24126947 ~ 24127908 (-)
G31090 NA non-coding downstream 188129 24122812 ~ 24125661 (-)
G31082 LOC107710764 non-coding downstream 212923 24100450 ~ 24100867 (-)
G31142 NA non-coding upstream 17556 24331877 ~ 24332563 (-)
G31152 NA non-coding upstream 110606 24424927 ~ 24433401 (-)
LOC122343161 LOC107743936,LOC101883431 non-coding upstream 131208 24445529 ~ 24448290 (-)
G31124 NA non-coding upstream 139140 24453461 ~ 24464894 (-)
G31121 NA non-coding upstream 143093 24457414 ~ 24458259 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other downstream 203117 24110224 ~ 24110673 (-)
G31050 NA other downstream 542022 23745486 ~ 23771768 (-)
G31017 NA other downstream 767421 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 876775 23416891 ~ 23437015 (-)
G30457 NA other downstream 2097320 22216035 ~ 22216470 (-)
LOC122342340 NA other upstream 9649 24323970 ~ 24327263 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 439735 24754056 ~ 24760786 (-)
G31314 NA other upstream 1244719 25559040 ~ 25561198 (-)
G31394 NA other upstream 1859378 26173699 ~ 26175249 (-)
G31400 LOC102197881 other upstream 2010158 26324479 ~ 26325236 (-)

Expression


Co-expression Network