LOC122343185


Basic Information

Item Value
gene id LOC122343185
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18956218 ~ 18958048 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250707.1
ATGTAAGTTATCAGACGTTAGTGAGTTTGTGTCAGCTTTTGCAAATTATAGGATCTGGAAACCAGTGAAGGTTTGAATTCTCCCAGCGTTGATTGTACCTCCAGAAAGGAAAGAATCAGATTTGGAGACCAGCGGAGGTTTGACCTCTACCAGCTAAACGTGGGCTTCAACATCTGAAGAGAGGGAGATGATCGATCTGCTGGCTGAACTTCAGGCCGCGACAGTTCTCAAAGACAGCCTTTTACTGAAGACATCCCATCACGGTTTTCCCAATTTAGGGATTTATACTACATGTGCTCCTTTCATGTAAGATGTATTCCCATCAGGAGCGGTGGAATGAGGGAAGCACAATGCTCAGGGCACTTACTAACCTGCACATGGTCAGGCTGACAGGCTACAGCAAGAATCTGAATGCTAAGCTCTTGTCTACGTTGAAGACCTGCATTGAATCTCTCAATCCTGATGTCTTGGGAGACCATCAGCAAATGAGGGCGAGTTCCAGCTTCGCCGACTCCACATTTGCAACAGCTGTGGCTGTGTGAGGAGCTTCAGAGAGGACTCCAACTACCTCTCACTGATCAGTCCTCAAAGAATCCTCACTGACAACCTGCGGCAATACTTCAAAGCATCTTCATTTGAATGCTCCTGCAGTGAGTGTCTCATCTGGGCAGCAGTTAGTATTGTGTGACACCAGTATCAAAAGAACCAGATGGTCAAAAGCATCAAGTAACATGGCCATGAACGGATACATGCTCTTCCATGTGAAGAGCTCAGCTGCAGCATGTTGATGCtgttttatagaggaaaggaacAACTTCCAAAGTCAAAAATTGGACTAGAGAAGATGCTTCCGTGGTTTCTCCAGTCTCCAAGAACTCATCCGCCTTCCACGATTAGTACTGGAATCTGgaacctttttaaaatagcGAGACACTTTATAAAGGAGGACAAGTGACATTTCAAAAGTTTCATAACACGGGAATCTTCTTGCGCAACAATAATAGTCCAAAAGAATGGATCGGTTTCATTCAAAGTCAAGCCAAAAGCTAAATGTGGCTATAAACGTTATATGCACTGTGTCCACTGCAAGTGGATGTTTTTGTGGAGTTGTGGAGACATATGAAGAGATGCTCATCTAAACCAATCAACACCATGGCAGGAAGTGAGTTCTTGACCTTGCAGCACTGGTAACATCTGCAGGCTCTAGAACTGAAGATggcatgctta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250707.1 True 1227 lncRNA 0.45 8 18956218 18958048

Neighbor

gene id symbol gene type direction distance location
LOC122343034 NA coding downstream 28838 18923263 ~ 18927380 (-)
LOC122342975 LOC107571373 coding downstream 103592 18843947 ~ 18852626 (-)
LOC122342979 LOC107694482,LOC107578888 coding downstream 115502 18836618 ~ 18840716 (-)
scgn scgn,LOC107747999,LOC107663245,LOC107693759,LOC107757885 coding downstream 287409 18662858 ~ 18668809 (-)
LOC122342949 NA coding downstream 351908 18594319 ~ 18604310 (-)
LOC122342237 NA coding upstream 9213 18967261 ~ 18970537 (-)
LOC122343103 NA coding upstream 57037 19015085 ~ 19017227 (-)
LOC122342247 NA coding upstream 513385 19471433 ~ 19474667 (-)
LOC122342252 LOC107695509,LOC107701922 coding upstream 704850 19662898 ~ 19677320 (-)
LOC122342256 NA coding upstream 794366 19752414 ~ 19754123 (-)
LOC122343202 NA non-coding downstream 95048 18857887 ~ 18861170 (-)
G29753 NA non-coding downstream 98497 18857474 ~ 18857721 (-)
G29741 NA non-coding downstream 149550 18800904 ~ 18806668 (-)
G29738 LOC107710542 non-coding downstream 169526 18786196 ~ 18786692 (-)
G29736 NA non-coding downstream 172303 18783605 ~ 18783915 (-)
G29796 NA non-coding upstream 8728 18966776 ~ 18967064 (-)
G29806 NA non-coding upstream 87769 19045817 ~ 19053531 (-)
LOC122343199 NA non-coding upstream 267926 19225974 ~ 19226499 (-)
LOC122343183 NA non-coding upstream 374874 19332922 ~ 19333726 (-)
G29829 NA non-coding upstream 623308 19581356 ~ 19581782 (-)
G29787 NA other downstream 24343 18931536 ~ 18931875 (-)
LOC122343130 NA other downstream 38685 18916326 ~ 18917533 (-)
LOC122343082 NA other downstream 53666 18898807 ~ 18902552 (-)
LOC122342944 LOC107581743 other downstream 220578 18693002 ~ 18735640 (-)
LOC122343054 NA other downstream 294565 18655244 ~ 18661653 (-)
LOC122342243 NA other upstream 375681 19333729 ~ 19337492 (-)
LOC122343146 NA other upstream 1042940 20000988 ~ 20009712 (-)
G29902 NA other upstream 1279089 20237137 ~ 20238554 (-)
G29906 NA other upstream 1323058 20281106 ~ 20282400 (-)
LOC122343123 NA other upstream 1900375 20858423 ~ 20864406 (-)

Expression


Co-expression Network