LOC122343187


Basic Information

Item Value
gene id LOC122343187
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 24004973 ~ 24006236 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250709.1
CAGGGTAACTCTTATACAACTCATCCGGGCCAGAAACACTACAAGGATGATCAACAACCTCTAAAGCTGGCATTACTTTACCACCCGCTAAATCATTGCCAAGAATGAACGAAACTCCCTTAATAGGAAGAGAAGGGCGAACAGCGACCAACACAAACCCGATTGCAGAGACACCGGCTTCACACGGGAAGGCTGGGACTGAACAGAAGGAGTTTTATCTGACCGCACGGAAGTATACACGCTCTTGTGCGTAAGCACAAACTCATCCGCAAACACCGCTGCTTGCGACAACGAAACAACTTTTTGTTCGTTCAGGTACAAGCTCGTAAGCACGGAGAATGGCTGATTTAACGGTCTCGTATTGTAGACTCTCCTCTAAGGACAACGTTGAACAAACCTCCTGTGCCTTGCCAACCAATTTGCACTGGAGAAGAAGGGACCAAACATCTTTCGGCCAACAAAATGAGGATGCGACACGCTCGAAAGCGCTAAAATACGTATCAACCTCAGTCTCCCTAAACGGAGGCACTAACGAAATATGCTTGCTAACGTCAAACATGGGTGAGGATGGATCAACAACTTGAGCAGAAACAGAAGACTGCACAGTAATTCTAGCAGAACTCTTAGAGTCCAACTCGAGCTGTCGCAGCTTCACCTCTTTCTCAGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250709.1 True 669 lncRNA 0.47 3 24004973 24006236

Neighbor

gene id symbol gene type direction distance location
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding downstream 75439 23816849 ~ 23929534 (-)
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 277055 23725752 ~ 23727918 (-)
LOC122343073 NA coding downstream 745654 23256365 ~ 23259319 (-)
LOC122342325 LOC107741456 coding downstream 754359 23240075 ~ 23250614 (-)
LOC122342324 NA coding downstream 767893 23230042 ~ 23237080 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding upstream 201419 24207655 ~ 24220008 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding upstream 259113 24265349 ~ 24266607 (-)
LOC122342338 NA coding upstream 306606 24312842 ~ 24319112 (-)
ckap4 NA coding upstream 470760 24476996 ~ 24479914 (-)
LOC122343108 LOC107677819,LOC107725800 coding upstream 479126 24485362 ~ 24492499 (-)
LOC122343184 NA non-coding downstream 225007 23767277 ~ 23779966 (-)
LOC122343194 NA non-coding downstream 261453 23732753 ~ 23743520 (-)
LOC122343201 NA non-coding downstream 272977 23728035 ~ 23731996 (-)
LOC122343181 NA non-coding downstream 329015 23674126 ~ 23675958 (-)
LOC122343190 NA non-coding downstream 508222 23494326 ~ 23496751 (-)
G31064 NA non-coding upstream 8 24006244 ~ 24007202 (-)
G31072 NA non-coding upstream 30113 24036349 ~ 24036751 (-)
G31082 LOC107710764 non-coding upstream 94214 24100450 ~ 24100867 (-)
G31090 NA non-coding upstream 116576 24122812 ~ 24125661 (-)
G31088 NA non-coding upstream 120711 24126947 ~ 24127908 (-)
G31050 NA other downstream 233205 23745486 ~ 23771768 (-)
G31017 NA other downstream 458604 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 567958 23416891 ~ 23437015 (-)
G30450 NA other downstream 1759813 22128454 ~ 22245160 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 103988 24110224 ~ 24110673 (-)
G31134 NA other upstream 297860 24304096 ~ 24497596 (-)
G31120 NA other upstream 300265 24306501 ~ 24495178 (-)
LOC122342340 NA other upstream 317734 24323970 ~ 24327263 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other upstream 747820 24754056 ~ 24760786 (-)

Expression


Co-expression Network