LOC122343194


Basic Information

Item Value
gene id LOC122343194
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 23732753 ~ 23743520 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250716.1
TCTCGCGATACTTTGATGTTATGCACCTTGTACTTTACATGTGACGTTTACACCTGATCGTTTTTTCAAGCGAAAAGCCATCATTAACCAAATCATCATTTCAATGTTTATGCGGGGACATACATGAacataaagagaaaacaaagacattttgagaagttgtctagaaactgaacgttttgatcaaagtaagtcttcagctgtggagcagcttattcatAAGATGACGTCGGAGCAGAATCTGGATACAATGGAAGGTGAACATAAATGCTTAGAGgcaagagaaaaacagagagaaaaactaGGTAAAGAAACTTTAGTGCATAAATAAGCCTGTGTCATGAATCTATCTAACAATCTAACAAACATGagctgaacataaaa

Function

GO:

id name namespace
GO:0006030 chitin metabolic process biological_process
GO:0006032 chitin catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250716.1 True 384 lncRNA 0.36 3 23732753 23743520

Neighbor

gene id symbol gene type direction distance location
LOC122343107 LOC107566978,LOC107575457,LOC107561645,LOC107655025 coding downstream 4835 23725752 ~ 23727918 (-)
LOC122343073 NA coding downstream 473434 23256365 ~ 23259319 (-)
LOC122342325 LOC107741456 coding downstream 482139 23240075 ~ 23250614 (-)
LOC122342324 NA coding downstream 495673 23230042 ~ 23237080 (-)
LOC122342323 NA coding downstream 513580 23201470 ~ 23219173 (-)
LOC122343128 LOC107728228,LOC107569032,LOC107685875,LOC107705465,LOC107574018 coding upstream 73329 23816849 ~ 23929534 (-)
LOC122342994 LOC107749047,LOC107685875,LOC107728228,LOC107570416,LOC107671223 coding upstream 464135 24207655 ~ 24220008 (-)
LOC122343156 LOC107674852,LOC105007321,LOC107551422,LOC103361099,LOC107732279,LOC107677819,LOC107725800 coding upstream 521829 24265349 ~ 24266607 (-)
LOC122342338 NA coding upstream 569322 24312842 ~ 24319112 (-)
ckap4 NA coding upstream 733476 24476996 ~ 24479914 (-)
LOC122343201 NA non-coding downstream 757 23728035 ~ 23731996 (-)
LOC122343181 NA non-coding downstream 56795 23674126 ~ 23675958 (-)
LOC122343190 NA non-coding downstream 236002 23494326 ~ 23496751 (-)
G31024 NA non-coding downstream 257930 23474255 ~ 23474823 (-)
G31020 LOC107728228 non-coding downstream 261002 23458727 ~ 23471751 (-)
LOC122343184 NA non-coding upstream 23757 23767277 ~ 23779966 (-)
G31062 NA non-coding upstream 259346 24002866 ~ 24009615 (-)
G31063 NA non-coding upstream 260172 24003692 ~ 24010050 (-)
LOC122343187 NA non-coding upstream 261453 24004973 ~ 24006236 (-)
G31064 NA non-coding upstream 262724 24006244 ~ 24007202 (-)
G31017 NA other downstream 186384 23478525 ~ 23546369 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other downstream 295738 23416891 ~ 23437015 (-)
G30450 NA other downstream 1487593 22128454 ~ 22245160 (-)
G30457 NA other downstream 1516283 22216035 ~ 22216470 (-)
LOC122342302 NA other downstream 1960354 21769124 ~ 21772399 (-)
G31050 NA other upstream 1966 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 366704 24110224 ~ 24110673 (-)
G31134 NA other upstream 560576 24304096 ~ 24497596 (-)
G31120 NA other upstream 562981 24306501 ~ 24495178 (-)
LOC122342340 NA other upstream 580450 24323970 ~ 24327263 (-)

Expression


Co-expression Network