LOC122343195


Basic Information

Item Value
gene id LOC122343195
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 22396518 ~ 22398023 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250717.1
ATTACTTGCGAACGATAAAGtagccaaaaacaaaacaaacaaaaaaagaaaaaaatcgaTCTGTTTGGCTGATCCGGATAGAAGACGTGCACGCGCTGCTCATTCTCCAGAGTATCGGTTGTGCAGAAAAACCCCAGAGCCGGAAGTAACACACATTCAAAATCTGATTAAATGCTGTCTTTTTACAATAAGATATTAATTGCTCGTGTTTTCCTGATagtttactcacccccatgtcgATTAGTCAGCTGatcttggatgacatgggggtgtgttttcatttgaaagtgaactaatcctttaatatTACCATTGTTGATTGCACCAGTATTTGACAAGCAGCTTTTTGAGACAAACACTGAAGTCAAGCATAAGGACGTTCGTTGTGACAGTGAGACCttcaggcaggcagacagagcCATGATCAGAGCTAGAGTTCCACAGTTCCACAGTCGGGCGACGCTCTCCTCCTCCTACGATGGAAGAAGTCTTACAGCGGCTTACCAAGGTTAGCATCCACCAGAAGCAAATTATGGAGCATCTGGCTACACGCCAAGGGGAGGCAGAGCGCTTCCTGACCCCCGTGTGCAGGCCACCCGGTCACGGCCCAAGATGACTGTACATGACATGACATAGAGGCCTACTTCCAAATGTTTGAGTGCACACTTGAAAACAAAGCCCATGGATTTTGATTGCGTCTCTCGCATAGTCTGACAAAggagtataatttaaaaattgtgcAGTCAACTGATTGTGAAATGGAACTTTATGCTGATTTATCCTACCTCTATCATTCAGCACAAAtccaaatatttcataatgttttcatatttgcaatacaacaataaagcagacttgactatttgaatacattttgtaaattaaaggTACTGTACTTCAGTCACGTTCCAGCAGTGACATAGATGCTGGCTGGGTGactattttgttttgaaaaagtagCAACGCTGGAACtgaagtaagtgtgtgtg

Function

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0048584 positive regulation of response to stimulus biological_process
GO:0002376 immune system process biological_process
GO:0002682 regulation of immune system process biological_process
GO:0002684 positive regulation of immune system process biological_process
GO:0050776 regulation of immune response biological_process
GO:0050778 positive regulation of immune response biological_process

KEGG:

id description
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250717.1 True 989 lncRNA 0.42 3 22396518 22398023

Neighbor

gene id symbol gene type direction distance location
LOC122342948 LOC107575457,LOC107741609 coding downstream 918 22385863 ~ 22395600 (-)
LOC122342947 NA coding downstream 61725 22325510 ~ 22334793 (-)
LOC122343126 si:ch211-232d10.1,LOC107747635,LOC107569099,LOC107698614,LOC107574820 coding downstream 76421 22315908 ~ 22320097 (-)
LOC122343076 LOC107718513,LOC107692125 coding downstream 157511 22235757 ~ 22239007 (-)
LOC122343106 NA coding downstream 517726 21870415 ~ 21878792 (-)
LOC122343006 NA coding upstream 31051 22429074 ~ 22431623 (-)
LOC122343060 LOC107677814 coding upstream 97263 22495286 ~ 22499529 (-)
LOC122342313 LOC107703281,LOC107657504,LOC107693510,LOC107570418 coding upstream 170201 22568224 ~ 22577494 (-)
LOC122342314 LOC107575554,LOC107666720 coding upstream 180323 22578346 ~ 22585463 (-)
LOC122343061 LOC107677814 coding upstream 189700 22587723 ~ 22593908 (-)
G30465 NA non-coding downstream 115329 22280672 ~ 22281189 (-)
G30423 LOC107575420,LOC107667978,LOC107563545 non-coding downstream 586900 21676876 ~ 21809618 (-)
G30425 NA non-coding downstream 720387 21673723 ~ 21676131 (-)
LOC122343179 LOC107667978,LOC107563545,LOC107741456 non-coding downstream 723094 21668810 ~ 21673424 (-)
G30408 NA non-coding downstream 896520 21499638 ~ 21499998 (-)
G30506 NA non-coding upstream 27569 22425592 ~ 22428757 (-)
G30518 NA non-coding upstream 88752 22486775 ~ 22487119 (-)
G30520 NA non-coding upstream 89397 22487420 ~ 22488169 (-)
G30525 NA non-coding upstream 102139 22500162 ~ 22501174 (-)
G30547 NA non-coding upstream 171612 22569635 ~ 22570058 (-)
G30450 NA other downstream 151358 22128454 ~ 22245160 (-)
G30457 NA other downstream 180048 22216035 ~ 22216470 (-)
LOC122343153 NA other downstream 612927 21387853 ~ 21783591 (-)
LOC122342328 LOC107671223,LOC107685875,LOC107728228,LOC107749047,LOC107553362,LOC107574018,LOC107569032,LOC107575215 other upstream 1018868 23416891 ~ 23437015 (-)
G31017 NA other upstream 1080502 23478525 ~ 23546369 (-)
G31050 NA other upstream 1347463 23745486 ~ 23771768 (-)
G31091 kdm5a,LOC107710764,LOC107685890,LOC107693604 other upstream 1712201 24110224 ~ 24110673 (-)
G31134 NA other upstream 1906073 24304096 ~ 24497596 (-)

Expression


Co-expression Network