LOC122343202


Basic Information

Item Value
gene id LOC122343202
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 18857887 ~ 18861170 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250724.1
AAATTATCTAGACTGGGGTCAGCATGAATATAAAAGCTGAAACAGGCGCCTTTATTGGCTGGAAACATCTTTAATGGACCAGTAAACCTTTGTGCTCCAGGAAATGATAAACAGAAATACTCAGAGACTGCAGAGGAACAGAGGCTTTTCCTGACATTATCAGCGATACTATGTATTAAGAGAGAGCCCATAAgGCTATGTGGATGTAATCTCACCGCTCCTTCCTGTGAAAGCTTGTCTTCAGCTTTACAATCTTCAAACTgttggacctgagtaacaatgacctgcaggattcaggaatgatgctgctttctgaaggactgaagagtccaaactgtcaacTAAAGATActgaatttatgcattttgaatTATGATTAAATCACATGACTGTGGTGagttattttaattgcacattttacCTTAAATTGACACACATTAAAGAACTTGTTCATGTCTGtcatgattgaggggtctgaggcgtgcggatccattcgcaggcttttattgagcaaaggcatgatcaaagcaggcagacgtcaaaacacagcaaacgggaatatcagaggcaaggcatcaacagaatccaaaaacagacggcaaaaatgtaaatgtaaatgtaaatgtaaaataaaaaattaatccgTCTGTAGGTGGCATTAAGTCACCGTTAATAAGCGAGCCATAACAACTGAACCgattcacatttacattcacatttacactgaatttttacatttacattccaagaaattcctgaaaaaagctgcaaacctgtttgttatttctgattttttttttctcttgattTGACTTGGTCACTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250724.1 True 826 lncRNA 0.38 3 18857887 18861170

Neighbor

gene id symbol gene type direction distance location
LOC122342975 LOC107571373 coding downstream 5261 18843947 ~ 18852626 (-)
LOC122342979 LOC107694482,LOC107578888 coding downstream 17171 18836618 ~ 18840716 (-)
scgn scgn,LOC107747999,LOC107663245,LOC107693759,LOC107757885 coding downstream 189078 18662858 ~ 18668809 (-)
LOC122342949 NA coding downstream 253577 18594319 ~ 18604310 (-)
LOC122343043 LOC107724037,LOC107685393,LOC107554738 coding downstream 266500 18587663 ~ 18591387 (-)
LOC122343034 NA coding upstream 62093 18923263 ~ 18927380 (-)
LOC122342237 NA coding upstream 106091 18967261 ~ 18970537 (-)
LOC122343103 NA coding upstream 153915 19015085 ~ 19017227 (-)
LOC122342247 NA coding upstream 610263 19471433 ~ 19474667 (-)
LOC122342252 LOC107695509,LOC107701922 coding upstream 801728 19662898 ~ 19677320 (-)
G29753 NA non-coding downstream 166 18857474 ~ 18857721 (-)
G29741 NA non-coding downstream 51219 18800904 ~ 18806668 (-)
G29738 LOC107710542 non-coding downstream 71195 18786196 ~ 18786692 (-)
G29736 NA non-coding downstream 73972 18783605 ~ 18783915 (-)
G29726 NA non-coding downstream 110579 18744601 ~ 18747308 (-)
LOC122343185 NA non-coding upstream 95048 18956218 ~ 18958048 (-)
G29796 NA non-coding upstream 105606 18966776 ~ 18967064 (-)
G29806 NA non-coding upstream 184647 19045817 ~ 19053531 (-)
LOC122343199 NA non-coding upstream 364804 19225974 ~ 19226499 (-)
LOC122343183 NA non-coding upstream 471752 19332922 ~ 19333726 (-)
LOC122342944 LOC107581743 other downstream 122247 18693002 ~ 18735640 (-)
LOC122343054 NA other downstream 196234 18655244 ~ 18661653 (-)
G29653 LOC107663329,LOC107575399,LOC107749046,LOC107758217,LOC107576964,LOC107665206,LOC107571858,LOC107671223,LOC107576424 other downstream 429544 18408560 ~ 18428343 (-)
G29473 NA other downstream 877965 17970605 ~ 17979922 (-)
G29417 NA other downstream 1121613 17735350 ~ 17736274 (-)
LOC122343082 NA other upstream 37637 18898807 ~ 18902552 (-)
LOC122343130 NA other upstream 55156 18916326 ~ 18917533 (-)
G29787 NA other upstream 70366 18931536 ~ 18931875 (-)
LOC122342243 NA other upstream 472559 19333729 ~ 19337492 (-)
LOC122343146 NA other upstream 1139818 20000988 ~ 20009712 (-)

Expression


Co-expression Network