LOC122343359


Basic Information

Item Value
gene id LOC122343359
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26768931 ~ 26769820 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250760.1
ttttgttttctgtcgatggccatgagtttaatgactgctgtttattcagCTTGTTATTGGTATTACTGAGGATGCCGACTCCCAATTTGTGAATGCGTGCGAGCATACTTTTTCCGGTTTGGATTCTCCCTTTCGTCCTGGGCGATTAAATACGCCGTTCCTGACGTTTTTTTCCTGTCGCGCCGTGAACTTTCGGTTACTCGGAAGTCTTAGTTGATACGGAGATCTATTATCTGCTACCCGCTACCTGCTTCCCGCTATCTGCTACCCGCTACCTGCTATCTACTACTGATCCCTGAGCTGGGGTTCCACGGGTGCAGGAGCTTGAGGTGGTGGTGTCACTTCATCATTTGCTGTGGacacgtttgtgtgtgcagtgagtGTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250760.1 True 387 lncRNA 0.49 4 26768931 26769820

Neighbor

gene id symbol gene type direction distance location
LOC122342366 LOC107709221 coding upstream 1758 26764953 ~ 26767173 (+)
trnav-aac_2 NA coding upstream 121974 26646885 ~ 26646957 (+)
trnav-cac NA coding upstream 123974 26644885 ~ 26644957 (+)
trnav-aac_1 NA coding upstream 124727 26644132 ~ 26644204 (+)
trnav-aac NA coding upstream 125796 26643063 ~ 26643135 (+)
trnay-gua_25 NA coding downstream 160732 26930552 ~ 26930638 (+)
LOC122342369 NA coding downstream 234881 27004701 ~ 27006306 (+)
trnas-aga_109 NA coding downstream 238801 27008621 ~ 27008702 (+)
trnas-uga_107 NA coding downstream 241154 27010974 ~ 27011055 (+)
trnas-uga_108 NA coding downstream 243812 27013632 ~ 27013713 (+)
G31412 NA non-coding upstream 289998 26478716 ~ 26478933 (+)
G31404 NA non-coding upstream 324940 26443506 ~ 26443991 (+)
G31403 NA non-coding upstream 332332 26436348 ~ 26436599 (+)
LOC122343909 NA non-coding upstream 598275 26170519 ~ 26170656 (+)
LOC122343906 NA non-coding upstream 600892 26167899 ~ 26168039 (+)
G31420 NA non-coding downstream 9473 26779293 ~ 26779606 (+)
G31422 NA non-coding downstream 98372 26868192 ~ 26868471 (+)
G31424 NA non-coding downstream 131892 26901712 ~ 26902005 (+)
LOC122342584 NA non-coding downstream 163520 26933340 ~ 26934351 (+)
trnar-acg_23 NA non-coding downstream 183191 26953011 ~ 26953084 (+)
G31384 NA other upstream 955306 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1073550 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1080701 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2001379 24743848 ~ 24767552 (+)
G30882 NA other upstream 2040484 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 527716 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 586992 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 591023 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1437138 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1448913 28218733 ~ 28221417 (+)

Expression


Co-expression Network