CI01000004_11155692_11159471 (OPRK1)


Basic Information

Item Value
gene id CI01000004_11155692_11159471
gene name OPRK1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11154644 ~ 11160500 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11155692_11159471.mRNA
GTATATATATAAGTGTTGATTTATATTGATTTCTTGTTAATAATTGCTGTTCCATATCCATTTAACTCAGAAACCATTCAAACATCAAAGGGAACAGGCACGTGAATTTATATTGTAGCCTGCTAAAAAAACAGAACAGATGGACTTTGCCTCTTCATTTCAGAAGACCACAAGCCATCGCTCGTTAATCCTTTATTTAGCGCGTCTCGCGGCCACACAATTACGCACATCCTTCTTTGACCAGACTAATGCGGGTTTTCCCATCTTACATGGCTCTTCGAGTAAAAGGCAATGTCCACACACTCCGGAGAGCTTCAGTGGCTTTACTGTTATCTAGATTGAAACCGCAGTATTGCCTGTTGAGTTCTCACGCGACAGCGTGCGCGTGAAATGTCTCCAGACATGAAGTTTTGCGCGCGCCATCTCATGAAACACTAAAAGTATTTGAACGATCGCATTGTCTTAAGCTTTCAGACTCGTAAGACATTTTGAAGACAACTTTATTTCCGCCAATATAGGCAAAGAGTTGCAGTGAGACACTACAGCTGGTTAACGGACTGTAGATGGAGACCGTCACATGAGATCTGATGTCATACGGGACGCGCGGCAGAGGCAGCTGCTCTTGTAAGGTGGCAGTCAGTCATCAATTGAATAGGAGCGGGCCAAAGAAATCAACGCATTGCGCACAGACATCATTGTTGCTTTAAAACCTTGGGATTTTCAAATTAAATTAGCGGTTTGGAGTTTGTAACAAGGTAAGACTCTTATATTTGGTGTTTTGACAACTGTGCAACAGACATTTTTAGGTGTAAAGTGCAATACAGTATTATTTATCAGCAGACTGTATACATTTTTTAACAAATGTACAGGCTACTTAATAATTATGTTGTAAAAAGCTATCATTTATTAATCTCCGTCGTTTATTTATGAATTTCTGTTTATTTAACCCCCTTTTTTTGTTTTGTTGATATAATCTTTATTCTGAAGCAACTGAAGTTTTCCAGCGACTCAATTAGACATGTGATCTTATTTTGCAAATCAACAGACGATGGACAGCAACGTGGTGCAGATTTTTAAGGAGGACAAATGCCCCTTATCTCACCCCGAGAAGTGTTTACCCAACTTCACATGGCAGTCTGCTGTCTCGGACATTTATAACTATTCGCTGAATGAAAGCTGGACGAACGAACAGGAAACGATGTCCCCCATCATTCCGATAATCGCTGCCGTGTACTCTGTGGTGTTTGTTGTCGGACTAGTGGGAAACTGCCTTGTGATGTTTGTCATTATCAGATACACTAAAATGAAAACCGCCACCAACATCTACATCTTCAACCTGGCTGTTGCCGACGCCTTGGTAACCACCACCATGCCCTTCCAGAGCACAGATTACTTACTGAATTCCTGGCCGTTTGGTGAGGTTGTGTGTAAGGTTTTCATCTCCATCGACTACTACAACATGTTCACTAGTATCTTCACTTTGACCATGATGAGTGTGGACCGCTATGTGGCGGTCTGCCACCCCGTCAAGGCCCTGGACTTTCGGACACCGATGAAAGCTAAAATCATCAACATCTTCATCTGGGTGTTGTCCTCGGCTGCTGGGATTCCTGCAATGGTCCTTGGGAGCACTCAGACAAACAATGGCACAACAGAGTGTGCTCTGCAGTTTCCAGACCCATATATCTACTGGGACACATTGATGAAGATCTGCGTCTTCATCTTCGCCTTTGTGGCTCCTCTCCTCATCATCACCGTTTGCTACACGCTCATGGTCCTGCGCCTTAAGAGCGTCCGCCTGCTGTCGGGCTCACGGGAAAAAGACCGCAACCTGAGACGCATCACCCGCCTGGTGCTGGTTGTGGTTGCTGTGTTTGTGGTGTGCTGGACGCCCATACACATCTTCATCTTGGTCAAAGCTCTCGCGCCCGGAGTACCGGAGACCACAGCAGTCATGGCCGCCTACTTCTTCTGTGTGGCGCTTGGATACACCAACAGCAGTCTCAACCCCATCCTGTATGCTTTCCTTGATGAGAACTTCAAACGGTGCTTCAGGGACTTCTGCTGCCCAGGTCGGGCCAAGGGGGACGGGCACGGCGTTAGTCGGGTCAGAAGCACTCTTCGCGAGCACACGTGCCCAGCAGAGGCCAAAGGGGACGGAGGCCACGGTCGACCTGTATGACTAGCCGTGGAGCTGTCGTCCTTTCACGGTCGAGAGGACTCGAATGACCTGGGACTGACACAGATCACCACCTCCATCTGAGGAAGAGATTGTGCCCTTTACATTTCAACACAACTATTACTAGAGCCAAAAAGTGATCTTTTAGCGAAAGCATGGTCTTGTTTCGTATGTCCATATTCAAATTTCATCCTGTTTAAGGCCCTGTTTACACTAGTGCGTTTTCGTTTTAAAACACATAAATTTTGCTGCAGTTATGCCTGTTGTTTACACTAAAACCACAAAAACATTTTAGTTTGAAAACGCCGGGGTTGCGTTTCAGTATAAACGGAGACTTCTGAAAACAATGGTGTGGCTGCCCACATTCACTCTGCGTATCCTTGACGAACGTGTAAACAATAACATGGAGACTGACCTGCAATCTTTGCTGACTTTGTTGTCATTTTTAGCAGCCATTGTGCAGTTAAAGTCTGCATATTTTTAATACTGCAGCTACCTGCACAAGAAGCAACTGTTTACACTTGTACGTGCATGCCCAGTGTGCATGAACGGTCATGTGACATGAGTTTTCGGTCATGTAGTGTAGACGAAGATTGTTTCTGAAACGAGGATCGTTTTCATTTTAAAACACAGTTTTAAAATGAAAACGCACTAGTGTAAACAGGGCCTACATTTTTTTTGAATGTCCATTGACCAAAGATGATGTATGATTAAAATCTGGTCCCTCACAATGAAATGTCATGCTTAAAGATCCTTTTGCGTAATGTTATAAGTCCTTTGGGATAGATAGTATATTACTAGTCACTAGTATATAGTATGCTTGGGTACACATGATAAAACACAGTGTAGAAAAAACAACAAACAAACCATATGTTTGCATCTGTTTGTACTGTTAATTGTTTATTTGGGATTGTAAAACAGTCATGTTTTATATTAAAAAAATAAAAATTAAAAATAAATCAGTGTATAATAATAATCAGCAGTGTCACATAATTATGACTCAGGAAACTATATATCTCTAATGATGGAAAA

Function

symbol description
oprk1 Enables peptide binding activity. Predicted to be involved in G protein-coupled opioid receptor signaling pathway; neuropeptide signaling pathway; and sensory perception of pain. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Is expressed in central nervous system. Orthologous to human OPRK1 (opioid receptor kappa 1).

NR:

description
opioid receptor-like protein ZFOR3

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04214 OPRK1; kappa-type opioid receptor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11155692_11159471.mRNA True 3211 mRNA 0.43 3 11154644 11160500

Neighbor

gene id symbol gene type direction distance location
CI01000004_11091985_11100992 ATP6V1H coding upstream 52827 11091680 ~ 11101817 (+)
CI01000004_11062778_11066245 TCEA1 coding upstream 88399 11062193 ~ 11066245 (+)
CI01000004_11048490_11050698 NA coding upstream 103757 11048257 ~ 11050887 (+)
CI01000004_10930457_10940078 NA coding upstream 214253 10930269 ~ 10940391 (+)
CI01000004_10907590_10926357 MARCH6, MARCH6.L coding upstream 228012 10907240 ~ 10926632 (+)
CI01000004_11163514_11166543 NA coding downstream 2418 11162918 ~ 11166543 (+)
CI01000004_11168348_11170417 BAG1 coding downstream 7848 11168348 ~ 11170774 (+)
CI01000004_11181665_11204466 MYOM1A coding downstream 21165 11181665 ~ 11206343 (+)
CI01000004_11215878_11229028 LIPIN2, LPIN2 coding downstream 55182 11215682 ~ 11229122 (+)
CI01000004_11432849_11451784 MGC115231, YES1.L, YES1 coding downstream 272349 11432849 ~ 11452991 (+)
G31362 NA non-coding upstream 23699 11129485 ~ 11130945 (+)
G31353 NA non-coding upstream 92721 11061711 ~ 11061923 (+)
G31349 NA non-coding upstream 98581 11055743 ~ 11056063 (+)
G31348 NA non-coding upstream 99607 11054796 ~ 11055037 (+)
G31347 NA non-coding upstream 100514 11053929 ~ 11054130 (+)
G31338 NA non-coding downstream 11682 11172182 ~ 11175224 (+)
G31345 NA non-coding downstream 54281 11214781 ~ 11233117 (+)
G31425 NA non-coding downstream 133400 11293900 ~ 11294132 (+)
G31426 NA non-coding downstream 133859 11294359 ~ 11294617 (+)
G30797 NA other upstream 656856 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 2173660 8976254 ~ 8980984 (+)
G28859 NA other upstream 2555041 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 2703417 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 3498261 7654234 ~ 7656383 (+)
G31710 NA other downstream 476751 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 504273 11666900 ~ 11667659 (+)
G31865 NA other downstream 1031630 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 1482254 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 2863047 14035393 ~ 14039142 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015539 oprk1 coding NC_007113.7 CM002886.2 30878864 ~ 30886567 (+)
bowfin (Amia calva) AMCG00010835 oprd1a,LOC108411271,LOC107595906,LOC107732912 coding CM030133.1 CM030133.1 2180504 ~ 2182472 (-)