LOC122343400


Basic Information

Item Value
gene id LOC122343400
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25918811 ~ 25919410 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250768.1
ctgtcttttcctttgttttctgtcgatggccatgagtttaatgactgctgtttattcagCTTGTTATTGGTATTACTGAGGATGCCGACTCCCAATTTGTGAATGCGTGCGAGCATACTTTTTCCGGTTTGGATTCTCCCTTTCGTCCTGGGCGATTAAATACGCCGTTCCTGACGTTTTTTTCCTGTCGCGCCGTGAACTTTCGGTTACTCGGAAGTCTTAGTTGATACGGAGATCTATTATCTGCTACCCGCTACCTGCTTCCCGCTATCTGCTACCCGCTACCTGCTATCTACTACTGATCCCTGTGATTTGTGTTACtggtttctgttttgtttaaagtggtTCTGCTTGAGGGCATCTATTTGATTATGGAGTAGCCGGTGCCCTGTGTGGATTTTGCTCCTCCATTGTAAGCTGGGGAACAATAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250768.1 True 433 lncRNA 0.46 3 25918811 25919410

Neighbor

gene id symbol gene type direction distance location
hm13 hm13,LOC107569338 coding downstream 140290 25762532 ~ 25778521 (-)
si:ch73-181d5.4 NA coding downstream 157206 25741596 ~ 25761605 (-)
LOC122342461 tcfl5 coding downstream 177558 25728094 ~ 25741253 (-)
kcnk15 LOC107569336,LOC107690089,LOC107706811 coding downstream 223144 25686577 ~ 25695667 (-)
mtg2 mtg2,LOC107748997,LOC107754862 coding downstream 289436 25626607 ~ 25629375 (-)
LOC122342356 NA coding upstream 33350 25952760 ~ 25955621 (-)
trnas-uga_31 NA coding upstream 62056 25981466 ~ 25981546 (-)
trnak-uuu_27 NA coding upstream 65424 25984834 ~ 25984906 (-)
trnas-uga_32 NA coding upstream 66555 25985965 ~ 25986045 (-)
trnas-aga_31 NA coding upstream 66895 25986305 ~ 25986386 (-)
G31390 NA non-coding downstream 2854 25915697 ~ 25915957 (-)
G31387 LOC107579696,LOC107756720,LOC107686478,LOC107702036 non-coding downstream 103586 25813904 ~ 25815225 (-)
G31385 NA non-coding downstream 105196 25812640 ~ 25813615 (-)
G31381 NA non-coding downstream 130936 25787380 ~ 25787875 (-)
G31352 NA non-coding downstream 215744 25702270 ~ 25703067 (-)
LOC122342449 NA non-coding upstream 101138 26020548 ~ 26021384 (-)
LOC122343923 NA non-coding upstream 247775 26167185 ~ 26167290 (-)
trnas-gcu NA non-coding upstream 248993 26168403 ~ 26168482 (-)
trnap-agg_2 NA non-coding upstream 249214 26168624 ~ 26168695 (-)
LOC122343921 NA non-coding upstream 250396 26169806 ~ 26169915 (-)
G31314 NA other downstream 357613 25559040 ~ 25561198 (-)
LOC122342407 LOC101068103,LOC105418166,LOC106522608,LOC108412963,LOC105419408,LOC108431938,LOC107395447,LOC106674638 other downstream 1158025 24754056 ~ 24760786 (-)
G31134 NA other downstream 1421215 24304096 ~ 24497596 (-)
G31394 NA other upstream 254289 26173699 ~ 26175249 (-)
G31400 LOC102197881 other upstream 405069 26324479 ~ 26325236 (-)
G31463 LOC107665166,LOC107752513,LOC107549841 other upstream 1447002 27366412 ~ 27367649 (-)
G31467 zbtb22b,LOC107752533,LOC107665126,LOC107666316,LOC107549842,LOC107554346,LOC107753716 other upstream 1459649 27379059 ~ 27382827 (-)
LOC122342454 kifc1,LOC107665178,LOC107753731,LOC107666336,LOC107549825,LOC107554333 other upstream 1464343 27383753 ~ 27389398 (-)

Expression


Co-expression Network