LOC122343689


Basic Information

Item Value
gene id LOC122343689
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 15857384 ~ 15857502 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006250818.1
gcttacggccataccaccctgttcacgcctgatctcgtctgatctcagaagctaagcagagttgggcctagttagtacttggatgggagactgcctaggaataccaggtgctgtaagtt

Function

GO:

id name namespace
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006250818.1 True 119 rRNA 0.51 1 15857384 15857502

Neighbor

gene id symbol gene type direction distance location
LOC122343609 NA coding downstream 10297 15846969 ~ 15847087 (-)
tmem19 tmem19,LOC107758202,LOC107687559,LOC107719866,LOC107671498,LOC107600996 coding downstream 177266 15674819 ~ 15680118 (-)
zgc:171422 LOC107687561,LOC107758203,LOC107719867,LOC107671497 coding downstream 184150 15664443 ~ 15673234 (-)
slc37a3 slc37a3,LOC107601005,LOC107758206,LOC107562143,LOC107719875 coding downstream 193078 15656075 ~ 15664306 (-)
sapcd1 LOC107758208,LOC107687577,LOC107601016,LOC107719876,LOC107699195,LOC107562141 coding downstream 209541 15644189 ~ 15647843 (-)
LOC122343700 NA coding upstream 22619 15880121 ~ 15880239 (-)
LOC122343711 NA coding upstream 23018 15880520 ~ 15880638 (-)
LOC122343928 NA coding upstream 24999 15882501 ~ 15882619 (-)
LOC122343722 NA coding upstream 31380 15888882 ~ 15889000 (-)
LOC122343733 NA coding upstream 31777 15889279 ~ 15889397 (-)
G28895 NA non-coding downstream 13645 15843405 ~ 15843739 (-)
G28887 NA non-coding downstream 123501 15733363 ~ 15733883 (-)
G28870 NA non-coding downstream 202203 15565419 ~ 15655181 (-)
LOC122342747 NA non-coding downstream 412155 15443764 ~ 15445229 (-)
G28850 NA non-coding downstream 439146 15416856 ~ 15418238 (-)
G28897 NA non-coding upstream 70641 15928143 ~ 15928900 (-)
G28916 NA non-coding upstream 521198 16378700 ~ 16383670 (-)
G28933 NA non-coding upstream 554358 16411860 ~ 16419956 (-)
G28935 NA non-coding upstream 555025 16412527 ~ 16420139 (-)
G28966 NA non-coding upstream 603260 16460762 ~ 16461511 (-)
kiaa0930 zgc:172139,kiaa0930,LOC107601010,LOC107719873,LOC107687566,LOC107699202 other downstream 245809 15601440 ~ 15611575 (-)
LOC122342864 rpl34,LOC107566275,LOC107573163,LOC107681344 other downstream 829721 15024587 ~ 15027663 (-)
LOC122342642 pfkfb3 other downstream 1046673 14808543 ~ 14810711 (-)
LOC122342862 celsr1a,LOC107666207,LOC107710744,LOC107569230,LOC107721151,LOC107600014,LOC107689740 other downstream 1152762 14687873 ~ 14704622 (-)
cerk cerk,LOC107710741,LOC107689729,LOC107552286,LOC107600034,LOC107721152 other downstream 1680642 14155492 ~ 14176742 (-)
G28898 NA other upstream 74992 15932494 ~ 15932864 (-)
G29022 chrna2b,LOC107697311,LOC107589091,LOC107723144,LOC107746381,LOC107563692,LOC107701496 other upstream 850272 16707774 ~ 16708960 (-)
prkchb prkchb,LOC107743988,LOC107697294,LOC107701491,LOC107718442,LOC107589067,LOC107563690 other upstream 1028651 16886153 ~ 16900295 (-)
G29135 NA other upstream 1149425 17006927 ~ 17017823 (-)
xrcc3 xrcc3,LOC107755221,LOC107683971,LOC107560377 other upstream 1260841 17118343 ~ 17122129 (-)

Expression


Co-expression Network