CI01000004_11592217_11595358


Basic Information

Item Value
gene id CI01000004_11592217_11595358
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11592217 ~ 11595358 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11592217_11595358.mRNA
TTTGATCAGTGGCACTTCATCTGTAAAGTTATGGTCGATTAAAAAGGGCCAGACTAATGGGTGGGAAAATACTTGTTTGTTAATTGGTAATCGTCCACTGGGCTGGAAGCTCGTATTTTCTGTGGATCCTACATTCATTGGAGATCAGGATATCATGCTAGATGACATTACACTGACAGACTGTGCAGAGGGAGACATCCCTGCCGATTCAGATCATCTCAGCTGTGACTTTGAGAATGACACCTGTTCCTGGTACCATGACCAGTCAACTGAAATCACATGGAAAAGAGAAGATGGACAGAACCCTCCGTTTGGTTATGAGGGACCTGAACATGATCACACCACTGGTTCTGGCTATTTTATGTACATACCACCACAATGGTCATCTAAACCATCTAAGACAGCCAGACTGATTGGATTTCCACAGCAGGCCAAATGTGTCAGCTTCTGGTATATAATCTATGGTGGAAAAATTGGCTCTCTCAGATTCATAACCAAGCATGCTAATGGAAATCAGACACTTATGTGGATGAGGACAGGGACTCAAGGCAACAAGTGGCGTTTTGTGGACCTTAGTTTCGCAGACGGTGAAGAACCATTTCAGATGATATTTGAGGGCATCCTGGAAGGCACTAAAGGCTACATCGCCATAGATGACGTGCAGATGTCAAATGGGTCCTGCCCAGCTGAGCGGGAATGCACCTTCCAAGGCTCTCTATGTGGACTGTCGTCTGACCCTACAGCTGATTTTACCTGGATCCGAACTAACGGAGAACTGGCCACTGGCACCCCCAGCCCTGCAACGGACCATACTTTAGAGACTGATAAGGGCTTTTACCTGAGTGCACAGCTGTGGAAGAACCCCAGTGGCAGCAGAGGCAGCATGCTGATGGAGTTCAATCAACCATCCTCTGAGCACGGAGAGTGCTTGATGTTCTGGTACCACATGAGTGGAAGAGACGTGGGTTCTCTTAACCTCTATGTCCAGGAGCTGCACAGTGCCAAGTCTCAAATACTCGTATGGAGTGTGAGTGGAGATCAAGGAGAACAGTGGAGACACGGCAGAGCAACAGTTATAAGTCCTCACAGCCCATATAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11592217_11595358.mRNA True 1099 mRNA 0.47 6 11592217 11595358

Neighbor

gene id symbol gene type direction distance location
CI01000004_11547197_11557429 CACNB2B coding upstream 34663 11547197 ~ 11560552 (+)
CI01000004_11520078_11522835 NA coding upstream 69124 11519927 ~ 11523093 (+)
CI01000004_11505808_11516796 STAM coding upstream 74035 11505808 ~ 11518182 (+)
CI01000004_11489380_11502517 COLEC12 coding upstream 89349 11489380 ~ 11502868 (+)
CI01000004_11432849_11451784 MGC115231, YES1.L, YES1 coding upstream 139226 11432849 ~ 11452991 (+)
CI01000004_11598169_11606266 MALRD1 coding downstream 2811 11598169 ~ 11606283 (+)
CI01000004_11608619_11618346 MALRD1 coding downstream 13261 11608619 ~ 11618427 (+)
CI01000004_11622516_11634475 NA coding downstream 27158 11622516 ~ 11634925 (+)
CI01000004_11666900_11667179 NA coding downstream 71542 11666900 ~ 11667659 (+)
CI01000004_11668089_11670426 ACKR4A coding downstream 72345 11667703 ~ 11670922 (+)
G31690 NA non-coding upstream 26062 11515811 ~ 11566155 (+)
G31677 NA non-coding upstream 125846 11466036 ~ 11466371 (+)
G31665 NA non-coding upstream 185312 11406674 ~ 11406905 (+)
G31664 NA non-coding upstream 185606 11406286 ~ 11406611 (+)
G31721 NA non-coding downstream 97497 11692855 ~ 11694150 (+)
G31723 NA non-coding downstream 99029 11694387 ~ 11696280 (+)
G31727 NA non-coding downstream 111226 11706584 ~ 11706970 (+)
G31737 NA non-coding downstream 153167 11748525 ~ 11748761 (+)
G31625 NA non-coding downstream 195639 11790997 ~ 11803727 (+)
G30797 NA other upstream 1094429 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 2611233 8976254 ~ 8980984 (+)
G28859 NA other upstream 2992614 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 3140990 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 3935834 7654234 ~ 7656383 (+)
G31710 NA other downstream 41893 11637251 ~ 11642400 (+)
G31865 NA other downstream 596772 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 1047396 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 2428189 14035393 ~ 14039142 (+)

Expression


Co-expression Network