trnas-aga_18


Basic Information

Item Value
gene id trnas-aga_18
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25883382 ~ 25883462 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_440
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctcccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_440 True 81 tRNA 0.58 1 25883382 25883462

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_17 NA coding upstream 733 25882577 ~ 25882649 (+)
trnas-uga_17 NA coding upstream 13601 25869701 ~ 25869781 (+)
trnas-aga_17 NA coding upstream 13944 25869358 ~ 25869438 (+)
trnak-uuu_16 NA coding upstream 14745 25868565 ~ 25868637 (+)
trnas-uga_16 NA coding upstream 16239 25867062 ~ 25867143 (+)
trnak-uuu_18 NA coding downstream 1769 25885231 ~ 25885303 (+)
trnas-aga_19 NA coding downstream 2575 25886037 ~ 25886118 (+)
trnas-uga_18 NA coding downstream 2917 25886379 ~ 25886460 (+)
trnak-uuu_19 NA coding downstream 4426 25887888 ~ 25887960 (+)
trnas-aga_20 NA coding downstream 5629 25889091 ~ 25889172 (+)
G31388 NA non-coding upstream 65818 25817031 ~ 25817564 (+)
G31380 NA non-coding upstream 95481 25787380 ~ 25787901 (+)
G31228 NA non-coding upstream 567829 25315179 ~ 25315553 (+)
G31226 NA non-coding upstream 568786 25314223 ~ 25314596 (+)
G31223 NA non-coding upstream 894108 24988867 ~ 24989274 (+)
LOC122342592 NA non-coding downstream 32927 25916389 ~ 25917199 (+)
trnas-aga_27 NA non-coding downstream 49719 25933181 ~ 25933262 (+)
trnas-uga_25 NA non-coding downstream 52696 25936158 ~ 25936240 (+)
trnak-uuu_26 NA non-coding downstream 54185 25937647 ~ 25937719 (+)
trnas-aga_28 NA non-coding downstream 54990 25938452 ~ 25938533 (+)
G31384 NA other upstream 69757 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 188001 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 195152 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1115830 24743848 ~ 24767552 (+)
G30882 NA other upstream 1154935 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1414074 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1473350 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1477381 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2323496 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2335271 28218733 ~ 28221417 (+)

Expression


Co-expression Network