trnas-uga_28


Basic Information

Item Value
gene id trnas-uga_28
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25947134 ~ 25947215 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_472
gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggggtctccccgcgcaggttcgaaccctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_472 True 82 tRNA 0.60 1 25947134 25947215

Neighbor

gene id symbol gene type direction distance location
trnah-gug_3 NA coding upstream 37750 25909313 ~ 25909384 (+)
trnas-uga_24 NA coding upstream 38556 25908497 ~ 25908578 (+)
trnas-aga_26 NA coding upstream 38902 25908150 ~ 25908232 (+)
trnak-uuu_25 NA coding upstream 39714 25907348 ~ 25907420 (+)
trnas-uga_23 NA coding upstream 39896 25907157 ~ 25907238 (+)
LOC122342357 NA coding downstream 27662 25974877 ~ 25977623 (+)
trnaa-agc_2 NA coding downstream 51608 25998823 ~ 25998895 (+)
trnaa-agc_3 NA coding downstream 61830 26009045 ~ 26009117 (+)
trnaa-agc_4 NA coding downstream 84406 26031621 ~ 26031693 (+)
trnak-uuu_33 NA coding downstream 98461 26045676 ~ 26045748 (+)
trnas-aga_29 NA non-coding upstream 263 25946790 ~ 25946871 (+)
trnas-uga_27 NA non-coding upstream 2575 25944479 ~ 25944559 (+)
trnas-uga_26 NA non-coding upstream 5952 25941101 ~ 25941182 (+)
trnas-aga_28 NA non-coding upstream 8601 25938452 ~ 25938533 (+)
trnak-uuu_26 NA non-coding upstream 9415 25937647 ~ 25937719 (+)
trnas-aga_30 NA non-coding downstream 1861 25949076 ~ 25949159 (+)
trnas-uga_29 NA non-coding downstream 2209 25949424 ~ 25949505 (+)
trnas-uga_30 NA non-coding downstream 4422 25951637 ~ 25951718 (+)
LOC122342452 NA non-coding downstream 214276 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 220684 26167899 ~ 26168039 (+)
G31384 NA other upstream 133509 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 251753 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 258904 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1179582 24743848 ~ 24767552 (+)
G30882 NA other upstream 1218687 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1350321 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1409597 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1413628 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2259743 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2271518 28218733 ~ 28221417 (+)

Expression


Co-expression Network