trnas-aga_42


Basic Information

Item Value
gene id trnas-aga_42
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26054342 ~ 26054422 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_513
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctcccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_513 True 81 tRNA 0.58 1 26054342 26054422

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_35 NA coding upstream 736 26053534 ~ 26053606 (+)
trnas-uga_41 NA coding upstream 2235 26052026 ~ 26052107 (+)
trnas-aga_41 NA coding upstream 2577 26051683 ~ 26051765 (+)
trnak-uuu_34 NA coding upstream 3390 26050880 ~ 26050952 (+)
trnas-uga_40 NA coding upstream 4877 26049384 ~ 26049465 (+)
trnas-uga_42 NA coding downstream 263 26054685 ~ 26054766 (+)
trnak-uuu_36 NA coding downstream 1765 26056187 ~ 26056259 (+)
trnas-aga_43 NA coding downstream 2569 26056991 ~ 26057071 (+)
trnas-uga_43 NA coding downstream 2915 26057337 ~ 26057418 (+)
trnak-uuu_37 NA coding downstream 4419 26058841 ~ 26058913 (+)
trnas-uga_30 NA non-coding upstream 102624 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 104837 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 105183 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 107127 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 107471 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 107069 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 113477 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 116097 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 381926 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 389084 26443506 ~ 26443991 (+)
G31384 NA other upstream 240717 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 358961 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 366112 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1286790 24743848 ~ 24767552 (+)
G30882 NA other upstream 1325895 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1243114 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1302390 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1306421 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2152536 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2164311 28218733 ~ 28221417 (+)

Expression


Co-expression Network