trnas-aga_47


Basic Information

Item Value
gene id trnas-aga_47
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26067597 ~ 26067678 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_528
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_528 True 82 tRNA 0.59 1 26067597 26067678

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_40 NA coding upstream 735 26066790 ~ 26066862 (+)
trnas-uga_46 NA coding upstream 2225 26065292 ~ 26065372 (+)
trnas-aga_46 NA coding upstream 2567 26064950 ~ 26065030 (+)
trnak-uuu_39 NA coding upstream 3378 26064147 ~ 26064219 (+)
trnas-uga_45 NA coding upstream 4869 26062647 ~ 26062728 (+)
trnak-uuu_41 NA coding downstream 1769 26069447 ~ 26069519 (+)
trnas-aga_48 NA coding downstream 2577 26070255 ~ 26070334 (+)
trnas-uga_47 NA coding downstream 2916 26070594 ~ 26070675 (+)
trnak-uuu_42 NA coding downstream 4422 26072100 ~ 26072172 (+)
trnas-aga_49 NA coding downstream 5224 26072902 ~ 26072982 (+)
trnas-uga_30 NA non-coding upstream 115879 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 118092 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 118438 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 120382 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 120726 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 93813 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 100221 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 102841 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 368670 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 375828 26443506 ~ 26443991 (+)
G31384 NA other upstream 253972 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 372216 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 379367 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1300045 24743848 ~ 24767552 (+)
G30882 NA other upstream 1339150 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1229858 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1289134 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1293165 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2139280 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2151055 28218733 ~ 28221417 (+)

Expression


Co-expression Network