trnas-aga_51


Basic Information

Item Value
gene id trnas-aga_51
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26078194 ~ 26078275 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_539
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_539 True 82 tRNA 0.59 1 26078194 26078275

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_44 NA coding upstream 736 26077386 ~ 26077458 (+)
trnas-uga_49 NA coding upstream 2231 26075883 ~ 26075963 (+)
trnas-aga_50 NA coding upstream 2574 26075540 ~ 26075620 (+)
trnak-uuu_43 NA coding upstream 3385 26074737 ~ 26074809 (+)
trnas-uga_48 NA coding upstream 4872 26073242 ~ 26073322 (+)
trnas-uga_50 NA coding downstream 269 26078544 ~ 26078624 (+)
trnak-uuu_45 NA coding downstream 1770 26080045 ~ 26080117 (+)
trnas-aga_52 NA coding downstream 2579 26080854 ~ 26080935 (+)
trnas-uga_51 NA coding downstream 2924 26081199 ~ 26081280 (+)
trnak-uuu_46 NA coding downstream 4426 26082701 ~ 26082773 (+)
trnas-uga_30 NA non-coding upstream 126476 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 128689 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 129035 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 130979 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 131323 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 83216 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 89624 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 92244 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 358073 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 365231 26443506 ~ 26443991 (+)
G31384 NA other upstream 264569 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 382813 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 389964 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1310642 24743848 ~ 24767552 (+)
G30882 NA other upstream 1349747 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1219261 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1278537 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1282568 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2128683 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2140458 28218733 ~ 28221417 (+)

Expression


Co-expression Network