trnas-uga_53


Basic Information

Item Value
gene id trnas-uga_53
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26089505 ~ 26089586 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_552
gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggggtctccccgcgcaggttcgaaccctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_552 True 82 tRNA 0.60 1 26089505 26089586

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_47 NA coding upstream 1078 26088355 ~ 26088427 (+)
trnah-gug_7 NA coding upstream 1395 26088039 ~ 26088110 (+)
trnas-aga_54 NA coding upstream 2546 26086879 ~ 26086959 (+)
trnah-gug_6 NA coding upstream 4387 26085047 ~ 26085118 (+)
trnas-uga_52 NA coding upstream 5579 26083845 ~ 26083926 (+)
trnak-uuu_48 NA coding downstream 1423 26091009 ~ 26091081 (+)
trnas-aga_55 NA coding downstream 2232 26091818 ~ 26091899 (+)
trnak-uuu_49 NA coding downstream 4084 26093670 ~ 26093742 (+)
trnas-aga_56 NA coding downstream 6556 26096142 ~ 26096223 (+)
trnas-uga_54 NA coding downstream 6903 26096489 ~ 26096570 (+)
trnas-uga_30 NA non-coding upstream 137787 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 140000 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 140346 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 142290 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 142634 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 71905 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 78313 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 80933 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 346762 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 353920 26443506 ~ 26443991 (+)
G31384 NA other upstream 275880 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 394124 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 401275 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1321953 24743848 ~ 24767552 (+)
G30882 NA other upstream 1361058 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1207950 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1267226 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1271257 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2117372 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2129147 28218733 ~ 28221417 (+)

Expression


Co-expression Network