trnas-aga_55


Basic Information

Item Value
gene id trnas-aga_55
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26091818 ~ 26091899 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_555
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcgcaggttcgaatcctgccgaccacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_555 True 82 tRNA 0.60 1 26091818 26091899

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_48 NA coding upstream 737 26091009 ~ 26091081 (+)
trnas-uga_53 NA coding upstream 2232 26089505 ~ 26089586 (+)
trnak-uuu_47 NA coding upstream 3391 26088355 ~ 26088427 (+)
trnah-gug_7 NA coding upstream 3708 26088039 ~ 26088110 (+)
trnas-aga_54 NA coding upstream 4859 26086879 ~ 26086959 (+)
trnak-uuu_49 NA coding downstream 1771 26093670 ~ 26093742 (+)
trnas-aga_56 NA coding downstream 4243 26096142 ~ 26096223 (+)
trnas-uga_54 NA coding downstream 4590 26096489 ~ 26096570 (+)
trnak-uuu_50 NA coding downstream 6096 26097995 ~ 26098067 (+)
trnas-uga_55 NA coding downstream 6633 26098532 ~ 26098613 (+)
trnas-uga_30 NA non-coding upstream 140100 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 142313 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 142659 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 144603 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 144947 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 69592 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 76000 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 78620 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 344449 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 351607 26443506 ~ 26443991 (+)
G31384 NA other upstream 278193 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 396437 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 403588 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1324266 24743848 ~ 24767552 (+)
G30882 NA other upstream 1363371 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1205637 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1264913 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1268944 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2115059 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2126834 28218733 ~ 28221417 (+)

Expression


Co-expression Network