trnas-uga_54


Basic Information

Item Value
gene id trnas-uga_54
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26096489 ~ 26096570 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_558
gtagtcgtggccgagaggttaaggctatggacttgaaatccattggggtctccctgcgcaggttcgaaccctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_558 True 82 tRNA 0.57 1 26096489 26096570

Neighbor

gene id symbol gene type direction distance location
trnas-aga_56 NA coding upstream 266 26096142 ~ 26096223 (+)
trnak-uuu_49 NA coding upstream 2747 26093670 ~ 26093742 (+)
trnas-aga_55 NA coding upstream 4590 26091818 ~ 26091899 (+)
trnak-uuu_48 NA coding upstream 5408 26091009 ~ 26091081 (+)
trnas-uga_53 NA coding upstream 6903 26089505 ~ 26089586 (+)
trnak-uuu_50 NA coding downstream 1425 26097995 ~ 26098067 (+)
trnas-uga_55 NA coding downstream 1962 26098532 ~ 26098613 (+)
trnas-aga_57 NA coding downstream 4277 26100847 ~ 26100926 (+)
trnas-uga_56 NA coding downstream 4622 26101192 ~ 26101273 (+)
trnak-uuu_51 NA coding downstream 6129 26102699 ~ 26102771 (+)
trnas-uga_30 NA non-coding upstream 144771 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 146984 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 147330 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 149274 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 149618 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 64921 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 71329 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 73949 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 339778 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 346936 26443506 ~ 26443991 (+)
G31384 NA other upstream 282864 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 401108 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 408259 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1328937 24743848 ~ 24767552 (+)
G30882 NA other upstream 1368042 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1200966 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1260242 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1264273 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2110388 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2122163 28218733 ~ 28221417 (+)

Expression


Co-expression Network