CI01000004_12033980_12034384


Basic Information

Item Value
gene id CI01000004_12033980_12034384
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12033656 ~ 12034402 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12033980_12034384.mRNA
ATATATAAAACATTTTATATATCATAATTCATACGATTAAATATTTATGAATCATGAATAAAATCAAGCTAACACTGTCTTTATTACCATCATTATTTAATTATTTACAAAATGAATTTGAACAGTGTTACTAACAGCAAAAGATTTTTTTATTATGACTACAAAACTTAGGAGGCAAGTACCACTGAAGTGTACAATCATACTTCCAAATTTAAATTGGGTGATGATCTCAGTGAGCAGGGGTAGAATCCCAAATCCTATTAGCAGAATGTGTAGCTATCTCAGTTTCTGCTGGTCTGAGAGAGAGAGAGAGTGCTTTAGATTATGGGTGTGAATGCAGTGAGCCGGTTCCTCCCCACTGCAGCATTTGGCAGCGTGTGCCTCCACGTGCTTTCGCCTCTACTACTACTACTACCTCCCAACCGGAGAAGAATACGACCCCACCCTTTTCCTCCCCTTTCCCGCTTTATACGACAGAGTGCGCTGAGGGAAGTCATGTGGGTGGAGGGGAGGCGAGGCTCTGCAGTCTGTGAGGCGGTCTGCTGCGGCAGTGCAGAGAGCACAGATAGCGCTCCTCTTGACCCAGATTCCTCCGGTGCCACGTCACACTGGGTTAACATTAACCCCTGCACAGCAAGACATGGCAGGCTGCCCTCGGCAGACACGGCTAACAATCATACACACGCCTTTGGCCACAGAGTCTGTCCCCTCAATTATAAATTTAATTAAACACTTATTGTGATGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12033980_12034384.mRNA True 747 mRNA 0.44 1 12033656 12034402

Neighbor

gene id symbol gene type direction distance location
CI01000004_11897082_11898506 MYCB coding upstream 134441 11896232 ~ 11899215 (+)
CI01000004_11863724_11890961 NA coding upstream 142542 11863724 ~ 11891114 (+)
CI01000004_11776595_11786233 STARD3NL coding upstream 246739 11776419 ~ 11786917 (+)
CI01000004_11771176_11773391 EPDR1 coding upstream 260140 11771089 ~ 11773516 (+)
CI01000004_11750356_11765031 RANBP9 coding upstream 267552 11749765 ~ 11766104 (+)
CI01000004_12222833_12223126 NA coding downstream 187524 12221926 ~ 12223244 (+)
CI01000004_12331486_12332789 NA coding downstream 296438 12330840 ~ 12332997 (+)
CI01000004_12353073_12362622 KLHL18 coding downstream 318558 12352960 ~ 12362716 (+)
CI01000004_12362858_12363136 NA coding downstream 328405 12362807 ~ 12363136 (+)
CI01000004_12376518_12381495 NA coding downstream 342022 12376424 ~ 12381705 (+)
G31777 NA non-coding upstream 119 12031131 ~ 12033537 (+)
G31759 NA non-coding upstream 11988 12018548 ~ 12021668 (+)
G31773 NA non-coding upstream 32945 11994896 ~ 12000711 (+)
G31769 NA non-coding upstream 78742 11953371 ~ 11954914 (+)
G31778 NA non-coding upstream 82299 11950993 ~ 11951357 (+)
G31763 NA non-coding downstream 16423 12050825 ~ 12051571 (+)
G31852 NA non-coding downstream 124963 12159365 ~ 12159616 (+)
G31854 NA non-coding downstream 127956 12162358 ~ 12162817 (+)
G31805 NA non-coding downstream 135919 12170321 ~ 12170649 (+)
G31790 NA non-coding downstream 143498 12177900 ~ 12179820 (+)
CI01000004_11666900_11667179 NA other upstream 365997 11666900 ~ 11667659 (+)
G31710 NA other upstream 391256 11637251 ~ 11642400 (+)
G30797 NA other upstream 1535868 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 3052672 8976254 ~ 8980984 (+)
G28859 NA other upstream 3434053 8599235 ~ 8599603 (+)
G31865 NA other downstream 157728 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 608352 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 1989145 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 3056842 15091200 ~ 15097173 (+)
G34220 NA other downstream 3904955 15939357 ~ 15939950 (+)

Expression


Co-expression Network