trnas-aga_58


Basic Information

Item Value
gene id trnas-aga_58
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26108316 ~ 26108397 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_570
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_570 True 82 tRNA 0.59 1 26108316 26108397

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_54 NA coding upstream 737 26107507 ~ 26107579 (+)
trnas-uga_58 NA coding upstream 919 26107316 ~ 26107397 (+)
trnak-uuu_53 NA coding upstream 1467 26106777 ~ 26106849 (+)
trnak-uuu_52 NA coding upstream 3507 26104737 ~ 26104809 (+)
trnas-uga_57 NA coding upstream 5002 26103233 ~ 26103314 (+)
trnas-uga_59 NA coding downstream 265 26108662 ~ 26108743 (+)
trnas-aga_59 NA coding downstream 2567 26110964 ~ 26111045 (+)
trnas-uga_60 NA coding downstream 2912 26111309 ~ 26111389 (+)
trnak-uuu_55 NA coding downstream 6875 26115272 ~ 26115344 (+)
trnas-aga_60 NA coding downstream 7684 26116081 ~ 26116162 (+)
trnas-uga_30 NA non-coding upstream 156598 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 158811 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 159157 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 161101 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 161445 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 53094 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 59502 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 62122 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 327951 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 335109 26443506 ~ 26443991 (+)
G31384 NA other upstream 294691 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 412935 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 420086 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1340764 24743848 ~ 24767552 (+)
G30882 NA other upstream 1379869 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1189139 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1248415 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1252446 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2098561 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2110336 28218733 ~ 28221417 (+)

Expression


Co-expression Network