trnas-aga_60


Basic Information

Item Value
gene id trnas-aga_60
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26116081 ~ 26116162 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_575
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_575 True 82 tRNA 0.59 1 26116081 26116162

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_55 NA coding upstream 737 26115272 ~ 26115344 (+)
trnas-uga_60 NA coding upstream 4692 26111309 ~ 26111389 (+)
trnas-aga_59 NA coding upstream 5036 26110964 ~ 26111045 (+)
trnas-uga_59 NA coding upstream 7338 26108662 ~ 26108743 (+)
trnas-aga_58 NA coding upstream 7684 26108316 ~ 26108397 (+)
trnas-uga_61 NA coding downstream 265 26116427 ~ 26116508 (+)
trnak-uuu_56 NA coding downstream 1772 26117934 ~ 26118006 (+)
trnah-gug_8 NA coding downstream 3585 26119747 ~ 26119818 (+)
trnak-uuu_57 NA coding downstream 3894 26120056 ~ 26120128 (+)
trnas-aga_61 NA coding downstream 4704 26120866 ~ 26120946 (+)
trnas-uga_30 NA non-coding upstream 164363 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 166576 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 166922 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 168866 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 169210 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 45329 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 51737 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 54357 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 320186 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 327344 26443506 ~ 26443991 (+)
G31384 NA other upstream 302456 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 420700 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 427851 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1348529 24743848 ~ 24767552 (+)
G30882 NA other upstream 1387634 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1181374 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1240650 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1244681 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2090796 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2102571 28218733 ~ 28221417 (+)

Expression


Co-expression Network