trnas-aga_61


Basic Information

Item Value
gene id trnas-aga_61
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26120866 ~ 26120946 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_580
gtagtcgtggccgagtggttaaggcgatggactagaaatccattgggatctcccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_580 True 81 tRNA 0.57 1 26120866 26120946

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_57 NA coding upstream 738 26120056 ~ 26120128 (+)
trnah-gug_8 NA coding upstream 1048 26119747 ~ 26119818 (+)
trnak-uuu_56 NA coding upstream 2860 26117934 ~ 26118006 (+)
trnas-uga_61 NA coding upstream 4358 26116427 ~ 26116508 (+)
trnas-aga_60 NA coding upstream 4704 26116081 ~ 26116162 (+)
trnas-uga_62 NA coding downstream 266 26121212 ~ 26121293 (+)
trnah-gug_9 NA coding downstream 1454 26122400 ~ 26122471 (+)
trnak-uuu_58 NA coding downstream 1767 26122713 ~ 26122785 (+)
trnas-aga_62 NA coding downstream 2571 26123517 ~ 26123598 (+)
trnas-uga_63 NA coding downstream 2917 26123863 ~ 26123944 (+)
trnas-uga_30 NA non-coding upstream 169148 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 171361 25949424 ~ 25949505 (+)
trnas-aga_30 NA non-coding upstream 171707 25949076 ~ 25949159 (+)
trnas-uga_28 NA non-coding upstream 173651 25947134 ~ 25947215 (+)
trnas-aga_29 NA non-coding upstream 173995 25946790 ~ 25946871 (+)
LOC122342452 NA non-coding downstream 40545 26161491 ~ 26163397 (+)
LOC122343906 NA non-coding downstream 46953 26167899 ~ 26168039 (+)
LOC122343909 NA non-coding downstream 49573 26170519 ~ 26170656 (+)
G31403 NA non-coding downstream 315402 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 322560 26443506 ~ 26443991 (+)
G31384 NA other upstream 307241 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 425485 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 432636 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1353314 24743848 ~ 24767552 (+)
G30882 NA other upstream 1392419 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1176590 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1235866 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1239897 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 2086012 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 2097787 28218733 ~ 28221417 (+)

Expression


Co-expression Network