CI01000004_12222833_12223126


Basic Information

Item Value
gene id CI01000004_12222833_12223126
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12221926 ~ 12223244 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12222833_12223126.mRNA
ATATTAATACAATGTTTGTCAACTAATATATCACAAAAAATGTTCAAGAATAATAAAGATTAAATTATATATATATATATATATATACACCAACTAAGCACTATTAAAAAATTAAAAATACAGAAGAGGCTTCCTACAGTAGAAGACCCCCTTTAAGGACCCCCATAAAGGCTATTACAGAAGGGTGGCAATGTCCCATTCAATCAGAGAAGAAGGGGGTGCTGGAGGGGGCAAACAGGTTTTGGGAAGACTTGAGCTCAGTTCTCCAAGTGCACACACAGAAAAGGTGCTTCAAAGCTCAACCATTCTCCTATCAATGAACTATTTTTTTTTTCAGTACTGTTAGATGCATATTTTCTGTGGTCTAAGCCTATTACTTGCGGTAAAAAGAGTAAATGTGATGTGGTATTGCTGAGGTACAGGCCTCCACTGGAATTACAAACTTCAGCATTGCAAACAACACTGTCTGGAAGCACAGAGACACAATGCAGAGCAGATGTTGTGCTCAACATCAGCAGTGCCATACATGTTAAATGATGCATCGGTAACAAAGCAGCAGGAAGAAGTTTTGAGAGACTATGTTGGTCATATAACCAGATAATGTATTTCTAAGCTATTCAAAACTGTGCGGTTATATGGATGAAAAAAAAAAAAAAAAAAAGATTATGCTTTGCCTACAAACAACAACTGAATGACAAGAGCAATAGTTCAATTGACAGGTGTCAATTAAGCGTGCAGGACTGTTTATGGTCAAATTAAACAGTCAGTTAGTATCAACGCATGAAAAAAGCAAAATTATATTAGTATAAACGTCTGAATAGGACTCTCGTGCCAAGAAACGCTTTGAAATAATGAACGCTAAAACGCATTTGAAATTGAAGCGGATAATGACGCTGTGAGCGAAGCGATGGCGTTGCATTCCTACCTTTCTTTCCATTGCTGCAAGTTTGATGCTCTCAGTTCAGCTGAGGAGGTGAAACCCCTGAATTACACGCGGTCGATGTGCGGCAACTTCTTCGTTGTTCCAGACAGATTCTCGGCTACTCCCCCCTCCCCTGGGATTGAGCGCTGGATGGAGGGATGCAGGCGAGGAAGGCCCCGTGTCTGTGATTTCAGTCGGGCTCTGGCGGCGGTGAGTGCGGCAGACGCAGCAGCGCAGGCGCGGGGATCGTCCGACACGAGCGATTCAATGAAGGTTTAAGGGAACGTCGTCAAACTACAGTCAAATGGAAGCAATCTGTACATTTCGGTCAGATAGAGAAAATTTCCTTTATTCTTAATACGATAAAGTACATTCATAGTACTTTATCGTATAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12222833_12223126.mRNA True 1319 mRNA 0.41 1 12221926 12223244

Neighbor

gene id symbol gene type direction distance location
CI01000004_12033980_12034384 NA coding upstream 187524 12033656 ~ 12034402 (+)
CI01000004_11897082_11898506 MYCB coding upstream 322711 11896232 ~ 11899215 (+)
CI01000004_11863724_11890961 NA coding upstream 330812 11863724 ~ 11891114 (+)
CI01000004_11776595_11786233 STARD3NL coding upstream 435009 11776419 ~ 11786917 (+)
CI01000004_11771176_11773391 EPDR1 coding upstream 448410 11771089 ~ 11773516 (+)
CI01000004_12331486_12332789 NA coding downstream 107596 12330840 ~ 12332997 (+)
CI01000004_12353073_12362622 KLHL18 coding downstream 129716 12352960 ~ 12362716 (+)
CI01000004_12362858_12363136 NA coding downstream 139563 12362807 ~ 12363136 (+)
CI01000004_12376518_12381495 NA coding downstream 153180 12376424 ~ 12381705 (+)
CI01000004_12390372_12391923 CCR9A coding downstream 167128 12390372 ~ 12392180 (+)
G31865 NA non-coding upstream 24508 12192130 ~ 12197418 (+)
G31887 NA non-coding upstream 33231 12188353 ~ 12188695 (+)
G31886 NA non-coding upstream 35532 12186024 ~ 12186394 (+)
G31885 NA non-coding upstream 37173 12184284 ~ 12184753 (+)
G31800 NA non-coding upstream 39041 12182432 ~ 12182885 (+)
G31864 NA non-coding downstream 16563 12239807 ~ 12292695 (+)
G31881 NA non-coding downstream 46589 12269833 ~ 12270489 (+)
G31863 NA non-coding downstream 55636 12278880 ~ 12297009 (+)
G31874 NA non-coding downstream 79375 12302619 ~ 12304869 (+)
G31930 NA non-coding downstream 128038 12351282 ~ 12351482 (+)
CI01000004_11666900_11667179 NA other upstream 554267 11666900 ~ 11667659 (+)
G31710 NA other upstream 579526 11637251 ~ 11642400 (+)
G30797 NA other upstream 1724138 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 3240942 8976254 ~ 8980984 (+)
CI01000004_12646972_12652534 NA other downstream 419510 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 1800303 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 2868000 15091200 ~ 15097173 (+)
G34220 NA other downstream 3716113 15939357 ~ 15939950 (+)
G33815 NA other downstream 3840171 16063415 ~ 16066464 (+)

Expression


Co-expression Network