CI01000004_12331486_12332789


Basic Information

Item Value
gene id CI01000004_12331486_12332789
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12330840 ~ 12332997 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12331486_12332789.mRNA
ATATAAAAACAGTGTCACATGATTTGATCTGATGGAGTTGATTTTCTGTTTTATATTGTATTTCCCTTTTCTCTTTTTTTGTATGTGTGTTTTTCCTTTGTGTCTTGTCTGACATTCGTTGGTATTATTATATTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGTCCTTGAATCATTCAAGGGGTTCGTCCAGTAATGAAACAAGTAAAGTCTTTATGAGTGACTCATTGAATCATTCATCAAACTGATTTTTAAAAAAAAATAATTTAAATGAATTAAATATTTTTAAACACACTGCATCAATTACATTTTGTCAGAACCTCTAGTAAATTACATGTTATTTTGAATCGTGATCTCTATTTTAAACCAAAAAATGTATCCAATTATGCAGATATTGCAAGGATTAATTGCTAACCCAGGGTAAAATATGAACAGCAAAAAAAACAAGGGTCATGTTAATCTAGTTATTGGGAATTAGAAATTGTCAAAATGGAATGAATCACAAAGACAAGACAAGCAACAAAGCCGCTGATTGTCAGGCACCTAGACGCTCTGAGCTGAGCATGTTTTATCAGTTTGACCATTCCTGAGATTCACACACTTGGCAGTCATTTAAAGGAAGTACTCAACATGATAATCCGATGAGTAAAGTGTCACACTCATCAAGCTTTCACGACATCCTCTACCAGCTTAAGCTGTATTGTGCAACTTCTCCCAAAGAAAGAGTGCTGACAGAGGCGTCGTATTTTCAGCCCCTGCCTCAGGGTGTCCCTCTCCCAAAGCGCTCAACCTTTTATCCTACGCTCACATATGATATAAAAGAGTTGGCAAAATCAGCAAACGGTATTGTTCTGTACATCAGGATTCAGAAGCCCAAATTCAGGCCAGTGGTGCCTAATGCAACACTTCATTACATAAACCTGAACATTTTAAAAGCCACATCAGGACAAATGCACCACTGGGTTTGAACATGGCACATTTGAGGATCTGTCACAGCCGGCTTGCAGGATCGAAGTCTGCAGCATTAACGGAGTTGAGAGCTCTGAGGGGTTAATGTGAAAAGCAATCAATGCTGATGGACTTAGGGATCATGAACAAAGAATGGTGCAATATGTAGCGAACGACATGAAATGACTTAGTAAAAAGAGAAGTAGAGAGAAGGACAATGAGAGGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12331486_12332789.mRNA True 1181 mRNA 0.36 2 12330840 12332997

Neighbor

gene id symbol gene type direction distance location
CI01000004_12222833_12223126 NA coding upstream 107596 12221926 ~ 12223244 (+)
CI01000004_12033980_12034384 NA coding upstream 296438 12033656 ~ 12034402 (+)
CI01000004_11897082_11898506 MYCB coding upstream 431625 11896232 ~ 11899215 (+)
CI01000004_11863724_11890961 NA coding upstream 439726 11863724 ~ 11891114 (+)
CI01000004_11776595_11786233 STARD3NL coding upstream 543923 11776419 ~ 11786917 (+)
CI01000004_12353073_12362622 KLHL18 coding downstream 19963 12352960 ~ 12362716 (+)
CI01000004_12362858_12363136 NA coding downstream 29810 12362807 ~ 12363136 (+)
CI01000004_12376518_12381495 NA coding downstream 43427 12376424 ~ 12381705 (+)
CI01000004_12390372_12391923 CCR9A coding downstream 57375 12390372 ~ 12392180 (+)
CI01000004_12393203_12398519 NA coding downstream 59507 12392504 ~ 12399292 (+)
G31874 NA non-coding upstream 25971 12302619 ~ 12304869 (+)
G31863 NA non-coding upstream 33831 12278880 ~ 12297009 (+)
G31864 NA non-coding upstream 38145 12239807 ~ 12292695 (+)
G31881 NA non-coding upstream 60351 12269833 ~ 12270489 (+)
G31862 NA non-coding upstream 73699 12220661 ~ 12257141 (+)
G31930 NA non-coding downstream 18285 12351282 ~ 12351482 (+)
G31939 NA non-coding downstream 63394 12396391 ~ 12396626 (+)
G31952 NA non-coding downstream 129533 12462530 ~ 12463374 (+)
G31959 NA non-coding downstream 140126 12473123 ~ 12473405 (+)
G31967 NA non-coding downstream 151701 12484698 ~ 12484906 (+)
G31865 NA other upstream 135693 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 663181 11666900 ~ 11667659 (+)
G31710 NA other upstream 688440 11637251 ~ 11642400 (+)
G30797 NA other upstream 1833052 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 3349856 8976254 ~ 8980984 (+)
CI01000004_12646972_12652534 NA other downstream 309757 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 1690550 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 2758247 15091200 ~ 15097173 (+)
G34220 NA other downstream 3606360 15939357 ~ 15939950 (+)
G33815 NA other downstream 3730418 16063415 ~ 16066464 (+)

Expression


Co-expression Network