trnae-cuc_22


Basic Information

Item Value
gene id trnae-cuc_22
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26271831 ~ 26271902 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_702
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGCTGcggcccgggttcgattcccggtcagggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_702 True 72 tRNA 0.64 1 26271831 26271902

Neighbor

gene id symbol gene type direction distance location
trnae-cuc_21 NA coding upstream 1139 26270621 ~ 26270692 (+)
trnae-cuc_20 NA coding upstream 2558 26269202 ~ 26269273 (+)
trnae-cuc_19 NA coding upstream 3946 26267814 ~ 26267885 (+)
trnae-cuc_18 NA coding upstream 5836 26265924 ~ 26265995 (+)
trnae-cuc_17 NA coding upstream 16680 26255080 ~ 26255151 (+)
trnae-cuc_23 NA coding downstream 10072 26281974 ~ 26282045 (+)
trnae-cuc_24 NA coding downstream 21247 26293149 ~ 26293220 (+)
trnae-cuc_25 NA coding downstream 25584 26297486 ~ 26297557 (+)
trnae-cuc_26 NA coding downstream 27072 26298974 ~ 26299045 (+)
LOC122342362 NA coding downstream 111014 26382916 ~ 26427239 (+)
LOC122343909 NA non-coding upstream 101175 26170519 ~ 26170656 (+)
LOC122343906 NA non-coding upstream 103792 26167899 ~ 26168039 (+)
LOC122342452 NA non-coding upstream 108434 26161491 ~ 26163397 (+)
trnas-uga_30 NA non-coding upstream 320113 25951637 ~ 25951718 (+)
trnas-uga_29 NA non-coding upstream 322326 25949424 ~ 25949505 (+)
G31403 NA non-coding downstream 164446 26436348 ~ 26436599 (+)
G31404 NA non-coding downstream 171604 26443506 ~ 26443991 (+)
G31412 NA non-coding downstream 206814 26478716 ~ 26478933 (+)
LOC122343359 NA non-coding downstream 497029 26768931 ~ 26769820 (+)
G31420 NA non-coding downstream 507391 26779293 ~ 26779606 (+)
G31384 NA other upstream 458206 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 576450 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 583601 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1504279 24743848 ~ 24767552 (+)
G30882 NA other upstream 1543384 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 1025634 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 1084910 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 1088941 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1935056 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1946831 28218733 ~ 28221417 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnae-cuc-347 NA coding NC_048583.1 CM023237.2 3271416 ~ 3271487 (+)