trnas-aga_80


Basic Information

Item Value
gene id trnas-aga_80
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26521000 ~ 26521081 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_769
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctccctgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_769 True 82 tRNA 0.57 1 26521000 26521081

Neighbor

gene id symbol gene type direction distance location
trnas-uga_77 NA coding upstream 2577 26518343 ~ 26518423 (+)
trnas-aga_79 NA coding upstream 2924 26517997 ~ 26518076 (+)
trnak-uuu_79 NA coding upstream 3740 26517188 ~ 26517260 (+)
trnas-uga_76 NA coding upstream 5343 26515577 ~ 26515657 (+)
trnas-aga_78 NA coding upstream 5688 26515231 ~ 26515312 (+)
trnas-uga_78 NA coding downstream 266 26521347 ~ 26521428 (+)
trnas-aga_81 NA coding downstream 2763 26523844 ~ 26523923 (+)
trnas-uga_79 NA coding downstream 3108 26524189 ~ 26524269 (+)
trnas-aga_82 NA coding downstream 5360 26526441 ~ 26526522 (+)
trnas-uga_80 NA coding downstream 5708 26526789 ~ 26526870 (+)
G31412 NA non-coding upstream 42067 26478716 ~ 26478933 (+)
G31404 NA non-coding upstream 77009 26443506 ~ 26443991 (+)
G31403 NA non-coding upstream 84401 26436348 ~ 26436599 (+)
LOC122343909 NA non-coding upstream 350344 26170519 ~ 26170656 (+)
LOC122343906 NA non-coding upstream 352961 26167899 ~ 26168039 (+)
LOC122343359 NA non-coding downstream 247850 26768931 ~ 26769820 (+)
G31420 NA non-coding downstream 258212 26779293 ~ 26779606 (+)
G31422 NA non-coding downstream 347111 26868192 ~ 26868471 (+)
G31424 NA non-coding downstream 380631 26901712 ~ 26902005 (+)
LOC122342584 NA non-coding downstream 412259 26933340 ~ 26934351 (+)
G31384 NA other upstream 707375 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 825619 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 832770 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 1753448 24743848 ~ 24767552 (+)
G30882 NA other upstream 1792553 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 776455 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 835731 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 839762 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1685877 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1697652 28218733 ~ 28221417 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_028844 NA non-coding NC_007115.7 CM002888.2 30104185 ~ 30141117 (-)