Item | Value |
---|---|
gene id | CI01000004_12426409_12429382 |
gene name | TMEM53 |
gene type | coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000004 |
NCBI id | null |
chromosome length | 17451736 |
location | 12426409 ~ 12429470 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
symbol | description |
---|---|
tmem53 | Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM53 (transmembrane protein 53). |
id | name | namespace |
---|---|---|
GO:0008150 | biological_process | biological_process |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
CI01000004_12426409_12429382.mRNA | True | 1083 | mRNA | 0.47 | 3 | 12426409 | 12429470 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000004_12422242_12423747 | OPN4.1 | coding | upstream | 1716 | 12422080 ~ 12424693 (+) |
CI01000004_12418456_12419641 | NA | coding | upstream | 5390 | 12417696 ~ 12421019 (+) |
CI01000004_12412259_12417501 | NA | coding | upstream | 8892 | 12412135 ~ 12417517 (+) |
CI01000004_12393203_12398519 | NA | coding | upstream | 27117 | 12392504 ~ 12399292 (+) |
CI01000004_12390372_12391923 | CCR9A | coding | upstream | 34229 | 12390372 ~ 12392180 (+) |
CI01000004_12553125_12559468 | NA | coding | downstream | 123304 | 12552774 ~ 12559876 (+) |
CI01000004_12562823_12563491 | NA | coding | downstream | 131848 | 12561318 ~ 12563813 (+) |
CI01000004_12594138_12621268 | NA | coding | downstream | 163693 | 12593163 ~ 12621791 (+) |
CI01000004_12625701_12630744 | NA | coding | downstream | 194851 | 12624321 ~ 12630926 (+) |
CI01000004_12646972_12652534 | NA | coding | downstream | 217368 | 12646838 ~ 12652570 (+) |
G31939 | NA | non-coding | upstream | 29783 | 12396391 ~ 12396626 (+) |
G31930 | NA | non-coding | upstream | 74927 | 12351282 ~ 12351482 (+) |
G31874 | NA | non-coding | upstream | 121540 | 12302619 ~ 12304869 (+) |
G31863 | NA | non-coding | upstream | 129400 | 12278880 ~ 12297009 (+) |
G31881 | NA | non-coding | upstream | 155920 | 12269833 ~ 12270489 (+) |
G31952 | NA | non-coding | downstream | 33060 | 12462530 ~ 12463374 (+) |
G31959 | NA | non-coding | downstream | 43653 | 12473123 ~ 12473405 (+) |
G31967 | NA | non-coding | downstream | 55228 | 12484698 ~ 12484906 (+) |
G31969 | NA | non-coding | downstream | 57463 | 12486933 ~ 12487443 (+) |
G32296 | NA | non-coding | downstream | 72008 | 12501478 ~ 12501881 (+) |
G31865 | NA | other | upstream | 231262 | 12192130 ~ 12197418 (+) |
CI01000004_11666900_11667179 | NA | other | upstream | 758750 | 11666900 ~ 11667659 (+) |
G31710 | NA | other | upstream | 784009 | 11637251 ~ 11642400 (+) |
G30797 | NA | other | upstream | 1928621 | 10497376 ~ 10497788 (+) |
CI01000004_08976512_08980033 | TTPA | other | upstream | 3445425 | 8976254 ~ 8980984 (+) |
CI01000004_14036114_14036449 | KIAA0040 | other | downstream | 1594077 | 14035393 ~ 14039142 (+) |
CI01000004_15091390_15096502 | GA45B, GADD45B, GADD45BB | other | downstream | 2661774 | 15091200 ~ 15097173 (+) |
G34220 | NA | other | downstream | 3509887 | 15939357 ~ 15939950 (+) |
G33815 | NA | other | downstream | 3633945 | 16063415 ~ 16066464 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
zebrafish (Danio rerio) | XLOC_015582 | tmem53 | coding | NC_007113.7 | CM002886.2 | 32846602 ~ 32850621 (+) |