CI01000004_12574165_12577698


Basic Information

Item Value
gene id CI01000004_12574165_12577698
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12574085 ~ 12580179 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12574165_12577698.mRNA
AAATGCAACCCACAAATGGAGCACACTAAAGGAAGCCATTTCTGATTGAATGACCATTGACTGGGACAGGGGAAGAGGGAGGAGCCAGAGATGAGAAAGGAGAGAGACAGAGAGAGAGGGTGTGTGTGGTCTGGGCCTCGCTGGCTCCCGGGGTGTTCCGCTACACTGAGGACAGCACAGGGGAAGTGAGAGGAGGGAGCCAAGGTGGCGAATGAGAAGGGAAGGTGACAAGACATCAGGGAGAGTGCAATGAATTATTTATGAGGCCACTGATGGACAGGCTGAATAAGAGAGACAGAGGAGAGGGGGGAGACATAAGGATCAGTGGAGGGGAGGGGTGGACAGTAGAAACCAGGGTCTCTTTCATGCTTTGCACACACATATATACACTCACACAGACAGACAGACGCACATACACACCACAAGCACTTGTGCAAGCCTGGCCGGAGAGGTAGGGTGATGGGACGCTTTGATTGTAACAAACCCCGAGCATAAGGGGTGCGAACTGCAGAGATCACAAGGGATGTGCGGTGTGAGGATATGCACGCGTCTTGTCTGTCCTGAGATCTGCCCGCAGTAAGAATGTAGCGGGCTTAAAAAAAAATAAAAAATAAGAGGACTGTCACCATTTTTCACAGTTCCTGGCCATAAGAAGACAGTATGTTTAACCTCAGTTCCCTCCTGGCGCTCTGGGCCTTGTTCAGGGCACATGTGAGTGATGTAGTGCTGAGAGCTACGTGTCCATGTGACCGCTCTGTAGGTGCACTACGAGGGGGGCTAGGACTGGTTAAAGCTGGGATGATGAATATTTAACCCTTGTAGACGGACGGTGGTTAATTTGTCAGATCCGCTGGTTAAATGCCACCATTAGCATTGGGCCCCGATATTGACGGGTGGAGGCTGGAAGCAGGGATGATGGATGTAGAACAGCCCAAACCAGACAGCCGGCTCATCACGTCGCTGTATCGACAGAATATTATTAACACAGCAGCAGAGCGTGCTACAACAGGTATAAGAGCTAGAAAAGACCCCCGAGGGTGGACACAAACACACACACACAAACTCACACTCAAAGCTAATAATTTACATACAAGCTACTACATTACAAGCTTATATTAATTTATATATAATGTCCATGTTATTGTGATATTAATGTGCTGCTGAAATTGCAATTGTTGAAAATGTAAACTAAATTTAGCATAGACTAAAAAACAAATAAAAAAAGTGTATACGGGTCATTGACGAATAAGGTTTTTAAAAGTGTAAAAACATAATGGAGATATAATTCATTTTGAAGTTTTATTAAGTGGTAACAATGAGATTATGTGGTTGTTATAATCAATTAACACTGCTTCTGTCATTTTTTACAAGATGGACAAAATTTGTCACCAAAAAAGTAATTCAGTTTAACCAAAATTTCGGTTTTACCGAATGACACTTTTGGTTATACCGAATTACGATATTTTCAAACAATGCTAACAGGCTGATATCTAGCTAGCTAGCTAGCAAAAGGAAAATCAAACATGTTATATTTAGTACAAGTTTTTAAAATATTTCTACATTTTCCATGTTTTATAGCGGTTGTACCGAATGACCTGATGTTTCAGGACATGCGTATAAGCAAGTGAAAAATTTTTCAAATAGTTAAGAGAGAGTTAGTTACTTTGCTTCACTACCATGTGATCCTTTGCAGGTGTCTGAATGATGTCACATCCTGTCACACGATATTGACTGCATGACTTGATCCAAAATGGTCCCTTTATATTGGTTACTCCGAATGACATCAATGAAATTCTTTTTTCCGGACATTCTTTCTCATAAAAAAGCAACGACTTCTACACATAATTTTAATACCATTTTGCACTATGTTGATATATGATGTTATAAAATCATGCCAGAATAAAAAAATATATACATTTATTACATTTTAAGATATTTTAATCACAAATGAAATGGCTATATTGACCTTTGGACAGTTAAACCAAATGACATTTTGACACTTCAAAATCTTTAAAATAAAATCTTTTGGATTCAATAAAAGAGATCTAGTTGTGCTACCTTACATACTTTGGATGTCATATCTTTGTTTTTTATTATTATTAAGGCCTTTGGACAAAAAAAAATTGACCCATATATATTTTTAGAATTATTATTTAAATATTAATATTAAAATACTTAAAAATGTATAAATCACTACAACATTCATATTAAGTTGTGAATGTTGCTATTTACTTTATTTTTGCTAGACAGTATGGAGGACAGGAAATGATAGGGAAGATTTGCAATTGATGAAAACCAGATCAAACTCACATCATTTACATGAGCACCATAAACTGCTAAGCCACAACACCAACCCGTCCTTCCGTTTACTCTTCATGAAATAAAGCTGAATCCTCAAAAAATACAGTAGGGCAAACAGTTTTATTACCCTTTACTTCAGTCCTTTTTCACTCTTGTGTTTTTTCAACACCTCTCAACAGCATGTGGCTAGGGGTGAGGGTCATGTCAGTGCTGTTCTTACAGCCACAGGTAAACCTCTCCCTGTGCTGCACGCCCTGCCATTACAGTGCACAGCAAACCTCAAACCCCTACCAAAACATTTCCCACCATGCAATCTGCCTAAGGAATGCAGACGTCTGCCCCGACCCCGCCAATTGCCCTGTTACCACGGATATAACACCAGGTTTCTGCGTGAGGCCATTTCTCCTCAGACACCTGCCACTGAAGCGGGCTCATAACATCCCTCCAGTTGTTACTGTGACATTGCCGCAAAGACAGGCAGTTTTAAAACCTCCACTTTACAGGCCCTTTTGCTATTCACACGGTATATGCCACCATCTACATCCGCTGCTGATGCAAACAGCCTCATACTGTCATTATGAGAATTCAGCTGGAGTCGTAACAGTTTGGAACAGATTGCCTGAAAATCCACCAAGGGAGAAAAACAAGAGGAAAAATAAAACTGGCTTTCTGGAGAGGCAAAAAACAAATCTTGTATTTCTTTGTGCATCATTCCGTGAAATACAAACACATCTGAGAAAACGAAGTGAAACATTCCTCTGTGTTCACCCCAGCTCTTGGTGGCAGATCTTTGCATCTCACCAGACTGAGGAGACCAGTAAAGAAAAAATTAAAGTGGTGGGCCTAGGCGGATGCCGTGCATTCTGCCGTGGGGATGTGGTATTAGACAGCCCGTATCCAAATGGCACCCGCAGAGCCGCGCGAGCACGGGAGCCAGGGGCCAACATGACTACAGGATTACACAGCAGCAGCGAGTGTTTACTGATTGCTGCATTTGCACGATCACTCATGCTGGGCGCTCGCGCATCTGTTCTTATTAGCCCTGAAGAGGAGTGGGCCATCAAAGGAAGGATATAAGCTCACACACGTCCAGCTGGCAGTGAGCATGCGGACACACACACACACACACAGAATTTGTACACAGACAAATTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12574165_12577698.mRNA True 3458 mRNA 0.42 4 12574085 12580179

Neighbor

gene id symbol gene type direction distance location
CI01000004_12550061_12550882 NA coding downstream 23154 12549886 ~ 12550931 (-)
CI01000004_12404227_12411145 PRPF4BA coding downstream 162420 12403532 ~ 12411665 (-)
CI01000004_12364142_12368537 BFSP2 coding downstream 205413 12364035 ~ 12368672 (-)
CI01000004_12345221_12345884 NA coding downstream 227776 12344810 ~ 12346309 (-)
CI01000004_12315924_12323953 NRBP2, NRBP2A coding downstream 250132 12314745 ~ 12323953 (-)
CI01000004_12748162_12752913 NA coding upstream 167760 12747939 ~ 12753275 (-)
CI01000004_12781663_12809789 NA coding upstream 201346 12781525 ~ 12809789 (-)
CI01000004_12823734_12925962 B4GALT2 coding upstream 243555 12823734 ~ 12925962 (-)
CI01000004_12952019_12956814 ATP6V0B coding upstream 371580 12951759 ~ 12956814 (-)
CI01000004_13086552_13088659 NA coding upstream 504645 13084824 ~ 13088898 (-)
G32285 NA non-coding downstream 99903 12473942 ~ 12474182 (-)
G32281 NA non-coding downstream 106756 12467119 ~ 12467329 (-)
G32278 NA non-coding downstream 111744 12460478 ~ 12462341 (-)
G32276 NA non-coding downstream 114257 12459600 ~ 12459828 (-)
G32267 NA non-coding downstream 149616 12424161 ~ 12424469 (-)
G32647 NA non-coding upstream 13209 12593388 ~ 12594022 (-)
G32606 NA non-coding upstream 20621 12600800 ~ 12655827 (-)
G32707 NA non-coding upstream 126879 12707058 ~ 12713176 (-)
G32701 NA non-coding upstream 195603 12775782 ~ 12781490 (-)
G32207 NA other downstream 189305 12376168 ~ 12384780 (-)
G32150 NA other downstream 793134 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 1161178 11406957 ~ 11412907 (-)
G31203 NA other downstream 1823444 10746437 ~ 10750641 (-)
G30316 NA other downstream 3167164 9377937 ~ 9406921 (-)
CI01000004_14543631_14551256 NA other upstream 1970621 14541515 ~ 14551352 (-)
G33746 NA other upstream 1988614 14568793 ~ 14569264 (-)
G33750 NA other upstream 1998279 14578458 ~ 14579001 (-)
G33755 NA other upstream 2001227 14581406 ~ 14581873 (-)
G33756 NA other upstream 2004992 14585171 ~ 14585745 (-)

Expression


Co-expression Network