trnay-gua_27


Basic Information

Item Value
gene id trnay-gua_27
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26959042 ~ 26959128 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_868
CCTTcgatagctcagttggtagagcggaGGACTGTAGATCCTTAGGTTGCTGGTTCGACTCCGGCTCGAAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_868 True 73 tRNA 0.55 2 26959042 26959128

Neighbor

gene id symbol gene type direction distance location
trnay-gua_25 NA coding upstream 28404 26930552 ~ 26930638 (+)
LOC122342366 LOC107709221 coding upstream 191869 26764953 ~ 26767173 (+)
trnav-aac_2 NA coding upstream 312085 26646885 ~ 26646957 (+)
trnav-cac NA coding upstream 314085 26644885 ~ 26644957 (+)
trnav-aac_1 NA coding upstream 314838 26644132 ~ 26644204 (+)
LOC122342369 NA coding downstream 45573 27004701 ~ 27006306 (+)
trnas-aga_109 NA coding downstream 49493 27008621 ~ 27008702 (+)
trnas-uga_107 NA coding downstream 51846 27010974 ~ 27011055 (+)
trnas-uga_108 NA coding downstream 54504 27013632 ~ 27013713 (+)
trnak-uuu_101 NA coding downstream 56011 27015139 ~ 27015211 (+)
trnae-uuc_19 NA non-coding upstream 122 26958850 ~ 26958920 (+)
trnar-acg_24 NA non-coding upstream 474 26958496 ~ 26958568 (+)
trnay-gua_26 NA non-coding upstream 5396 26953560 ~ 26953646 (+)
trnar-acg_23 NA non-coding upstream 5958 26953011 ~ 26953084 (+)
LOC122342584 NA non-coding upstream 24691 26933340 ~ 26934351 (+)
trnae-uuc_20 NA non-coding downstream 1137 26960265 ~ 26960336 (+)
trnay-gua_28 NA non-coding downstream 1334 26960462 ~ 26960547 (+)
trnar-acg_25 NA non-coding downstream 2726 26961854 ~ 26961926 (+)
trnay-gua_29 NA non-coding downstream 3274 26962402 ~ 26962488 (+)
trnar-acg_26 NA non-coding downstream 4142 26963270 ~ 26963342 (+)
G31384 NA other upstream 1145417 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1263661 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1270812 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2191490 24743848 ~ 24767552 (+)
G30882 NA other upstream 2230595 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 338408 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 397684 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 401715 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1247830 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1259605 28218733 ~ 28221417 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) trnay-gua_21 NA misc NC_053118.1 CM020915.1 8828683 ~ 8828771 (+)
tiger barb (Puntius tetrazona) trnam-cau_8 NA coding NC_056702.1 CM032071.1 20074090 ~ 20074165 (+)