CI01000004_12625701_12630744



Basic Information


Item Value
gene id CI01000004_12625701_12630744
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12624321 ~ 12630926 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000004_12625701_12630744.mRNA
CTTTTAAAAGCATGCAATACACCAATGCTCACATCGCTCATAAATTCCCCCAAATTTCCATTTGGCTTTGAATAATATGATCTTAATTATTATTTTTGCCCTGTATAACATAATTCTAGGGTGTAATGATTTTTTATGCCCCTGACATATTGTTTGGAGGGTGACATAAAACTCTGATGACATGTGACATTTGGAAAAGGTCACCCCGCCCATCCCTGCTCATGTCTGTCTTCATAACACTGGCACTTGTCATATTGAAGCTGGCATTGGCAATCTTTGTCTCACAGGAAACCCTCAGCACTGTTCTTTTTGCTGGTCGTAGTTGTTGCCAGGCCTGGTCTTTTTTTTTTCTTGTGTGGTAGAAGGGAAGGAGAAAATTGTCACTGAAGGGAAAGAGGAACCGGATCACTCCCCCTCAGGGTTCCTGGGGGGCCACAAACAGCATGTCTGAGCCCGGTTCACGAGCACAGAATGACAGGGAGAAGCACTAATACTAATGTGGTAAATACGTCAGAAATGACTAGGGAAGGGCGGGAGAAGTTATGATGGAGGGCCGATACGCTGAGTCGAATGACAAGGGCTGATCTTTCTAAATTAAATGAAATTGCATTGTTGTTGTTTTGTGGGCCTTGGTTTAGAATCTGTCAGCATGTTACAAACCACAGCGCATTTATACAATTGCAAAAAGAATACAGCAAGACACTGACTCATTCATTTTACACGATTCCATACTTATAATCATCTTTAATATAATAATCATATAATATATTATTTTATTTTTTTATTTAAAATTATATTGTATAATATTATATATGTTATTAATGTATGTAAATTGATTGTAATTCTAACTTCTCCATTTTTAGACTGATTTTTAGATTTTTTTGTCATCCTTTTCATTATTATTCTTCCGGTCAGTTTTCAATTATGGAGTATTAGAAGAAAAATATGAGGCATTATTATATTATATTATATTATATTATATTATATTATATTATATTACAACAAATTGAAATATTATTTTCAAACATTAAACTGCATTGTAGAATTTTATTTGTCATTTTATCCTGTCAGTCTTATCATATCCACCTGTCTTTTTCTATTTCTGTTCTCTTTTATATTAATTTGTACTGCTGTGATGATACGCTTTTACCATTGCTGTTTGAAATTACCCTTTTCTGACAACTGAATTCTATGGTTTTAAAATGGCTGACCTCTGATCTCAGTCTGTTAAGTGATGTTTTTTGAGTAGGGCATTGCCTCACAGAGGACATAAAATATACATTTTTATGCATGTAGGGGTCCCAGCTTTGTGGTCGTAAATTATAGTAGGGCCGTCCTCACACCGCTATCCCACAGTGCAGTGGGCCAACCCTAAGCAAGATGGAGCTGTGGGACGGACAGGGCAGGATGCAACAGGTGACTCGCCTCTGCGAGGTGTCTGTTTGGTGTCGTGTGGCCTGCATTCTCCACTTCACACTCTCATTGTTATTTAATCCTGGTTTTGGTGCGGATGCTGATTTCAAAGTGGCAGTCCTCCTGAGCAGGGCAGGCAGCCCAGACTACAGCACCACCTGGCTGGCCGTTAGCCTGAGGAAGAGGCCCTTTGGAGAAACTTGGTACCACAGCCCACCCTGGCCTGTCAACCTGACAGAAACTGTCCCTCAGTCTTGGCCTTTCATATATACTTACGTTACGAGTGACAGTTTCTGGGACCAGGCCTCAGGCTCTTTCAGAGTGTCACATTTTACACTGCTGGAAAAAATTCCACTGTCTGTTTCACATCTAACTCTTAGGTGTTTATTTGTTATATCCACCCGTGCCAATTCAATAATTATGCAGGCAAACAGAGAGATTATGGAGACTCCCTATGAACTCCAGACTGGCTGGAGTCTGTCAATAAACAGGGCATGGGTCATTCTGCAGTTTGTAGTGTTAATGGCTCAAGGTCAGGGCCATAAAATGGGGGACAGAAAGGGTAGACGCGGCTTCTTGGGGTGGTTAAGAAGGGTTCAGAGTCTTAATAAGTCTTCATTCAGAGTGTTTTCTTTGAATACTATATCTCTCATCTCCAGACTTCCAAGTGTTGACACGGGCGTGAAGGTGGCTGGCTGTAACTGCGGCTTATTTAGTGTCAGGTCTCAGAGGCTGGTGTGTTTATGTGTGTGGGGAGGGTGTCAGTCACCCTGCTTTGGACCAGCCACCACCCTCCACCAGTCCGCAGCTGTGGGTCTGAGCCGTGCCACCTTCCTTGACACAATGGGGCCCTTTGACCACAGAGGGCAGATTGACACAAAGAGCCCTGCGTGCTGTACACTGCAGCACAATGCTATTGTTATCATATGCTGCTGAAAGCAAAGACCTGCTCTACTATTTGTCATTTTCAAGTGTCAAATGATTGCACAAATACAGTCTTTAAAAACACTTAGGAATGTAGACCTCATTTTATGAATGAAAAGAACAAGAACACAGTTAAGATGCAGAATTTTTTTAATGTTTCTTACTGTTGAAACATCACATGTGTGATCAAATAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000004_12625701_12630744.mRNA True 2531 mRNA 0.41 10 12624321 12630926
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000004_12594138_12621268 NA coding upstream 2530 12593163 ~ 12621791 (+)
CI01000004_12562823_12563491 NA coding upstream 60508 12561318 ~ 12563813 (+)
CI01000004_12553125_12559468 NA coding upstream 64445 12552774 ~ 12559876 (+)
CI01000004_12426409_12429382 TMEM53 coding upstream 194851 12426409 ~ 12429470 (+)
CI01000004_12422242_12423747 OPN4.1 coding upstream 199628 12422080 ~ 12424693 (+)
CI01000004_12646972_12652534 NA coding downstream 15912 12646838 ~ 12652570 (+)
CI01000004_12696326_12707951 NA coding downstream 63451 12694377 ~ 12707996 (+)
CI01000004_12719753_12721562 KLF17 coding downstream 87490 12718416 ~ 12722033 (+)
CI01000004_12764916_12775989 SLC6A9 coding downstream 133990 12764916 ~ 12776172 (+)
CI01000004_12810922_12817913 VWC2L.2 coding downstream 179646 12810572 ~ 12818547 (+)
G32296 NA non-coding upstream 122440 12501478 ~ 12501881 (+)
G31969 NA non-coding upstream 136878 12486933 ~ 12487443 (+)
G31967 NA non-coding upstream 139415 12484698 ~ 12484906 (+)
G31959 NA non-coding upstream 150916 12473123 ~ 12473405 (+)
G31952 NA non-coding upstream 160947 12462530 ~ 12463374 (+)
G32350 NA non-coding downstream 32653 12663579 ~ 12663812 (+)
G32371 NA non-coding downstream 69689 12700615 ~ 12700910 (+)
G32382 NA non-coding downstream 74038 12704964 ~ 12781485 (+)
G32414 NA non-coding downstream 178691 12809617 ~ 12810075 (+)
G32431 NA non-coding downstream 222036 12852962 ~ 12853804 (+)
G31865 NA other upstream 429174 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 956662 11666900 ~ 11667659 (+)
G31710 NA other upstream 981921 11637251 ~ 11642400 (+)
G30797 NA other upstream 2126533 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 3643337 8976254 ~ 8980984 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 1392621 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 2460318 15091200 ~ 15097173 (+)
G34220 NA other downstream 3308431 15939357 ~ 15939950 (+)
G33815 NA other downstream 3432489 16063415 ~ 16066464 (+)

Expression


CI01000004_12625701_12630744 Expression in PRJCA010000

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CI01000004_12625701_12630744 Expression in each Bioproject

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CI01000004_12625701_12630744 Expression in each Sample
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Co-expression Network