trnar-acg_28


Basic Information

Item Value
gene id trnar-acg_28
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26971912 ~ 26971986 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_883
gggccagtggcgcaatggataacgcgcgtctgactacggatcagaagattctaggttcgactcctggctggctcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_883 True 75 tRNA 0.59 1 26971912 26971986

Neighbor

gene id symbol gene type direction distance location
trnay-gua_25 NA coding upstream 41274 26930552 ~ 26930638 (+)
LOC122342366 LOC107709221 coding upstream 204739 26764953 ~ 26767173 (+)
trnav-aac_2 NA coding upstream 324955 26646885 ~ 26646957 (+)
trnav-cac NA coding upstream 326955 26644885 ~ 26644957 (+)
trnav-aac_1 NA coding upstream 327708 26644132 ~ 26644204 (+)
LOC122342369 NA coding downstream 32715 27004701 ~ 27006306 (+)
trnas-aga_109 NA coding downstream 36635 27008621 ~ 27008702 (+)
trnas-uga_107 NA coding downstream 38988 27010974 ~ 27011055 (+)
trnas-uga_108 NA coding downstream 41646 27013632 ~ 27013713 (+)
trnak-uuu_101 NA coding downstream 43153 27015139 ~ 27015211 (+)
trnay-gua_32 NA non-coding upstream 1309 26970518 ~ 26970603 (+)
trnae-uuc_22 NA non-coding upstream 1520 26970317 ~ 26970392 (+)
trnay-gua_31 NA non-coding upstream 4125 26967701 ~ 26967787 (+)
trnae-uuc_21 NA non-coding upstream 4338 26967503 ~ 26967574 (+)
trnar-acg_27 NA non-coding upstream 4695 26967145 ~ 26967217 (+)
trnae-uuc_23 NA non-coding downstream 282 26972268 ~ 26972339 (+)
trnay-gua_33 NA non-coding downstream 478 26972464 ~ 26972550 (+)
trnar-acg_29 NA non-coding downstream 1346 26973332 ~ 26973404 (+)
trnay-gua_34 NA non-coding downstream 1890 26973876 ~ 26973965 (+)
trnar-acg_30 NA non-coding downstream 2760 26974746 ~ 26974818 (+)
G31384 NA other upstream 1158287 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1276531 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1283682 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2204360 24743848 ~ 24767552 (+)
G30882 NA other upstream 2243465 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 325550 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 384826 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 388857 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1234972 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1246747 28218733 ~ 28221417 (+)

Expression


Co-expression Network