trnar-acg_29


Basic Information

Item Value
gene id trnar-acg_29
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 26973332 ~ 26973404 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_887
gggccagtggcgcaatggataacgcgtctgactacggatcagaagattctaggttcgactcctggctggctcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_887 True 73 tRNA 0.58 1 26973332 26973404

Neighbor

gene id symbol gene type direction distance location
trnay-gua_25 NA coding upstream 42694 26930552 ~ 26930638 (+)
LOC122342366 LOC107709221 coding upstream 206159 26764953 ~ 26767173 (+)
trnav-aac_2 NA coding upstream 326375 26646885 ~ 26646957 (+)
trnav-cac NA coding upstream 328375 26644885 ~ 26644957 (+)
trnav-aac_1 NA coding upstream 329128 26644132 ~ 26644204 (+)
LOC122342369 NA coding downstream 31297 27004701 ~ 27006306 (+)
trnas-aga_109 NA coding downstream 35217 27008621 ~ 27008702 (+)
trnas-uga_107 NA coding downstream 37570 27010974 ~ 27011055 (+)
trnas-uga_108 NA coding downstream 40228 27013632 ~ 27013713 (+)
trnak-uuu_101 NA coding downstream 41735 27015139 ~ 27015211 (+)
trnay-gua_33 NA non-coding upstream 782 26972464 ~ 26972550 (+)
trnae-uuc_23 NA non-coding upstream 993 26972268 ~ 26972339 (+)
trnar-acg_28 NA non-coding upstream 1346 26971912 ~ 26971986 (+)
trnay-gua_32 NA non-coding upstream 2729 26970518 ~ 26970603 (+)
trnae-uuc_22 NA non-coding upstream 2940 26970317 ~ 26970392 (+)
trnay-gua_34 NA non-coding downstream 472 26973876 ~ 26973965 (+)
trnar-acg_30 NA non-coding downstream 1342 26974746 ~ 26974818 (+)
trnae-uuc_24 NA non-coding downstream 1698 26975102 ~ 26975173 (+)
trnae-uuc_25 NA non-coding downstream 3120 26976524 ~ 26976595 (+)
trnay-gua_35 NA non-coding downstream 3316 26976720 ~ 26976806 (+)
G31384 NA other upstream 1159707 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1277951 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1285102 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2205780 24743848 ~ 24767552 (+)
G30882 NA other upstream 2244885 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 324132 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 383408 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 387439 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1233554 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1245329 28218733 ~ 28221417 (+)

Expression


Co-expression Network