CI01000004_12646972_12652534


Basic Information

Item Value
gene id CI01000004_12646972_12652534
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12646838 ~ 12652570 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_12646972_12652534.mRNA
GTATTAAAACACAGCCCGTCTCTCTCTCCCCCAAACCATCTCTCCATCCATATAAAGACAGAGTAAAACCTTCTTTTATTACCCGAGGGAATTAAATAACTTTTAGAATGTGGTTTTCTATAAAGCACCACACAATGAATATTCATGCTGGAGCGGGTCGGGCATTACTTGGGGTAAAAGTTGTATTTTTTTGTTGGGCTGGTGACGGCATACGGGCAAGTGAACCACAGCGATTTATGAAGCTGTTAAAGAAAAACAGCAGGCATGGAGCATGGATCACAGAGGACTCCACAGCGACCACACTGGAGGCGCTAAAGGCCCGCATACGAGAACTGGAGAAGCAAATTCTCAGAGGAGACCGATACAAGTGTCTCATATGCATGCGGAAGCCTCCCCAAACAGGGGCTGACGGCAAGAATCAGGCGGCCAAGAGGCACGGGAGCGCAGAGGCCCTGCAGCTCGGCGTGTACTGTTTGTACAGAGGCTTCGTAACGGGCTGCAGCACTGCCACTGCGGACAGCAGTGGGATTAAGAAGCTGCTCCCGCTCCGGAGGGACTCGTATACAATGCCACTCACCTCCATCCAGTGTTGGCATGTGCACTGTGAAGAATGCTGGCTAAGGACTCTGAATTATGATTGCCTCGACTTGTCCGATTGTAATCCCCACACTTATACTCGCTGGCTCTTCTCTCAAAGCTGTTTTAGCCAGTCTTCCTTGGGGAGCCCACTCTCATTAGCCGCTAACACGTTCTGTCACCACACGGAAACAATTAATAAGGAAATGTTTCCCAGCCTCAGCCGTTTTCCAATATGCTATATATTAAATCAGCTCCCTCCATCTCCGCTTATCACAAGGCCTTCTGTGCACGGCTTTCTGGAAAGAATGGAGACGTGTGTGTGCGCTGCCACAGCGGATTGTTAGTAATGCAGGCATTAAAATTGTTGCCTAAAGACAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_12646972_12652534.mRNA False 959 mRNA 0.49 5 12646838 12652570

Neighbor

gene id symbol gene type direction distance location
CI01000004_12625701_12630744 NA coding upstream 15912 12624321 ~ 12630926 (+)
CI01000004_12594138_12621268 NA coding upstream 25047 12593163 ~ 12621791 (+)
CI01000004_12562823_12563491 NA coding upstream 83025 12561318 ~ 12563813 (+)
CI01000004_12553125_12559468 NA coding upstream 86962 12552774 ~ 12559876 (+)
CI01000004_12426409_12429382 TMEM53 coding upstream 217368 12426409 ~ 12429470 (+)
CI01000004_12696326_12707951 NA coding downstream 41807 12694377 ~ 12707996 (+)
CI01000004_12719753_12721562 KLF17 coding downstream 65846 12718416 ~ 12722033 (+)
CI01000004_12764916_12775989 SLC6A9 coding downstream 112346 12764916 ~ 12776172 (+)
CI01000004_12810922_12817913 VWC2L.2 coding downstream 158002 12810572 ~ 12818547 (+)
CI01000004_12984968_12997831 KISS1R, KISS1RA, GPR54 coding downstream 332398 12984968 ~ 12998063 (+)
G32296 NA non-coding upstream 144957 12501478 ~ 12501881 (+)
G31969 NA non-coding upstream 159395 12486933 ~ 12487443 (+)
G31967 NA non-coding upstream 161932 12484698 ~ 12484906 (+)
G31959 NA non-coding upstream 173433 12473123 ~ 12473405 (+)
G31952 NA non-coding upstream 183464 12462530 ~ 12463374 (+)
G32350 NA non-coding downstream 11009 12663579 ~ 12663812 (+)
G32371 NA non-coding downstream 48045 12700615 ~ 12700910 (+)
G32382 NA non-coding downstream 52394 12704964 ~ 12781485 (+)
G32414 NA non-coding downstream 157047 12809617 ~ 12810075 (+)
G32431 NA non-coding downstream 200392 12852962 ~ 12853804 (+)
G31865 NA other upstream 451691 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 979179 11666900 ~ 11667659 (+)
G31710 NA other upstream 1004438 11637251 ~ 11642400 (+)
G30797 NA other upstream 2149050 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 3665854 8976254 ~ 8980984 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 1370977 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 2438674 15091200 ~ 15097173 (+)
G34220 NA other downstream 3286787 15939357 ~ 15939950 (+)
G33815 NA other downstream 3410845 16063415 ~ 16066464 (+)
G34400 NA other downstream 4324758 16971995 ~ 17025976 (+)

Expression


Co-expression Network