trnar-acg_39


Basic Information

Item Value
gene id trnar-acg_39
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27000219 ~ 27000291 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_919
gggccagtggcgcaatggataacgcgtctgactacggatcagaagattctaggttcgactcctggctggctcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_919 True 73 tRNA 0.58 1 27000219 27000291

Neighbor

gene id symbol gene type direction distance location
trnay-gua_25 NA coding upstream 69581 26930552 ~ 26930638 (+)
LOC122342366 LOC107709221 coding upstream 233046 26764953 ~ 26767173 (+)
trnav-aac_2 NA coding upstream 353262 26646885 ~ 26646957 (+)
trnav-cac NA coding upstream 355262 26644885 ~ 26644957 (+)
trnav-aac_1 NA coding upstream 356015 26644132 ~ 26644204 (+)
LOC122342369 NA coding downstream 4410 27004701 ~ 27006306 (+)
trnas-aga_109 NA coding downstream 8330 27008621 ~ 27008702 (+)
trnas-uga_107 NA coding downstream 10683 27010974 ~ 27011055 (+)
trnas-uga_108 NA coding downstream 13341 27013632 ~ 27013713 (+)
trnak-uuu_101 NA coding downstream 14848 27015139 ~ 27015211 (+)
trnay-gua_42 NA non-coding upstream 2347 26997786 ~ 26997872 (+)
trnae-uuc_31 NA non-coding upstream 2559 26997589 ~ 26997660 (+)
trnar-acg_38 NA non-coding upstream 2915 26997232 ~ 26997304 (+)
trnay-gua_41 NA non-coding upstream 5678 26994454 ~ 26994541 (+)
trnar-acg_37 NA non-coding upstream 6238 26993909 ~ 26993981 (+)
trnay-gua_43 NA non-coding downstream 478 27000769 ~ 27000855 (+)
G31428 LOC107574244,LOC107838241 non-coding downstream 84026 27084317 ~ 27084707 (+)
G31429 NA non-coding downstream 197596 27197887 ~ 27198266 (+)
G31438 NA non-coding downstream 232805 27233096 ~ 27233432 (+)
G31443 NA non-coding downstream 363297 27363588 ~ 27410595 (+)
G31384 NA other upstream 1186594 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1304838 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1311989 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2232667 24743848 ~ 24767552 (+)
G30882 NA other upstream 2271772 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 297245 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 356521 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 360552 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1206667 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1218442 28218733 ~ 28221417 (+)

Expression


Co-expression Network