trnas-aga_110


Basic Information

Item Value
gene id trnas-aga_110
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27015951 ~ 27016031 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_925
gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggctCCTCGCGcaagttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_925 True 81 tRNA 0.57 1 27015951 27016031

Neighbor

gene id symbol gene type direction distance location
trnak-uuu_101 NA coding upstream 740 27015139 ~ 27015211 (+)
trnas-uga_108 NA coding upstream 2238 27013632 ~ 27013713 (+)
trnas-uga_107 NA coding upstream 4896 27010974 ~ 27011055 (+)
trnas-aga_109 NA coding upstream 7249 27008621 ~ 27008702 (+)
LOC122342369 NA coding upstream 9645 27004701 ~ 27006306 (+)
trnas-aga_111 NA coding downstream 2584 27018615 ~ 27018696 (+)
trnas-uga_109 NA coding downstream 2927 27018958 ~ 27019037 (+)
trnak-uuu_102 NA coding downstream 4434 27020465 ~ 27020537 (+)
trnal-aag_29 NA coding downstream 10612 27026643 ~ 27026728 (+)
trnas-uga_110 NA coding downstream 41347 27057378 ~ 27057460 (+)
trnay-gua_43 NA non-coding upstream 15096 27000769 ~ 27000855 (+)
trnar-acg_39 NA non-coding upstream 15660 27000219 ~ 27000291 (+)
trnay-gua_42 NA non-coding upstream 18079 26997786 ~ 26997872 (+)
trnae-uuc_31 NA non-coding upstream 18291 26997589 ~ 26997660 (+)
trnar-acg_38 NA non-coding upstream 18647 26997232 ~ 26997304 (+)
G31428 LOC107574244,LOC107838241 non-coding downstream 68286 27084317 ~ 27084707 (+)
G31429 NA non-coding downstream 181856 27197887 ~ 27198266 (+)
G31438 NA non-coding downstream 217065 27233096 ~ 27233432 (+)
G31443 NA non-coding downstream 347557 27363588 ~ 27410595 (+)
LOC122343300 NA non-coding downstream 591756 27607787 ~ 27619661 (+)
G31384 NA other upstream 1202326 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1320570 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1327721 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2248399 24743848 ~ 24767552 (+)
G30882 NA other upstream 2287504 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 281505 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 340781 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 344812 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1190927 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1202702 28218733 ~ 28221417 (+)

Expression


Co-expression Network