trnas-uga_116


Basic Information

Item Value
gene id trnas-uga_116
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27075874 ~ 27075955 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_939
gtagtcgtggccgagaggttaaggcgatggacttgaaatccattggggtctccccgcgcaggttcgaaccctgccgactacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_939 True 82 tRNA 0.60 1 27075874 27075955

Neighbor

gene id symbol gene type direction distance location
trnas-aga_114 NA coding upstream 267 27075528 ~ 27075607 (+)
trnas-uga_115 NA coding upstream 2564 27073230 ~ 27073310 (+)
trnas-uga_114 NA coding upstream 5211 27070583 ~ 27070663 (+)
trnas-aga_113 NA coding upstream 5553 27070241 ~ 27070321 (+)
trnas-aga_112 NA coding upstream 8200 27067593 ~ 27067674 (+)
trnak-uuu_103 NA coding downstream 1414 27077369 ~ 27077440 (+)
trnas-uga_117 NA coding downstream 1944 27077899 ~ 27077980 (+)
trnas-aga_115 NA coding downstream 2939 27078894 ~ 27078975 (+)
trnas-uga_118 NA coding downstream 3284 27079239 ~ 27079320 (+)
trnah-gug_20 NA coding downstream 4104 27080059 ~ 27080130 (+)
trnay-gua_43 NA non-coding upstream 75019 27000769 ~ 27000855 (+)
trnar-acg_39 NA non-coding upstream 75583 27000219 ~ 27000291 (+)
trnay-gua_42 NA non-coding upstream 78002 26997786 ~ 26997872 (+)
trnae-uuc_31 NA non-coding upstream 78214 26997589 ~ 26997660 (+)
trnar-acg_38 NA non-coding upstream 78570 26997232 ~ 26997304 (+)
G31428 LOC107574244,LOC107838241 non-coding downstream 8362 27084317 ~ 27084707 (+)
G31429 NA non-coding downstream 121932 27197887 ~ 27198266 (+)
G31438 NA non-coding downstream 157141 27233096 ~ 27233432 (+)
G31443 NA non-coding downstream 287633 27363588 ~ 27410595 (+)
LOC122343300 NA non-coding downstream 531832 27607787 ~ 27619661 (+)
G31384 NA other upstream 1262249 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1380493 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1387644 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2308322 24743848 ~ 24767552 (+)
G30882 NA other upstream 2347427 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 221581 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 280857 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 284888 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1131003 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1142778 28218733 ~ 28221417 (+)

Expression


Co-expression Network