Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000004_12781663_12809789 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 12781525 ~ 12809789 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000004_12781663_12809789.mRNA | False | 1631 | mRNA | 0.48 | 9 | 12781525 | 12809789 |
| TU37176 | True | 250 | lncRNA | 0.46 | 1 | 12797682 | 12797931 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_12748162_12752913 | NA | coding | downstream | 28250 | 12747939 ~ 12753275 (-) |
| CI01000004_12574165_12577698 | NA | coding | downstream | 201346 | 12574085 ~ 12580179 (-) |
| CI01000004_12550061_12550882 | NA | coding | downstream | 230594 | 12549886 ~ 12550931 (-) |
| CI01000004_12404227_12411145 | PRPF4BA | coding | downstream | 369860 | 12403532 ~ 12411665 (-) |
| CI01000004_12364142_12368537 | BFSP2 | coding | downstream | 412853 | 12364035 ~ 12368672 (-) |
| CI01000004_12823734_12925962 | B4GALT2 | coding | upstream | 13945 | 12823734 ~ 12925962 (-) |
| CI01000004_12952019_12956814 | ATP6V0B | coding | upstream | 141970 | 12951759 ~ 12956814 (-) |
| CI01000004_13086552_13088659 | NA | coding | upstream | 275035 | 13084824 ~ 13088898 (-) |
| CI01000004_13089864_13091636 | NA | coding | upstream | 278794 | 13088583 ~ 13091669 (-) |
| CI01000004_13094468_13114401 | PTCH2 | coding | upstream | 283797 | 13093586 ~ 13114998 (-) |
| G32701 | NA | non-coding | downstream | 35 | 12775782 ~ 12781490 (-) |
| G32707 | NA | non-coding | downstream | 68349 | 12707058 ~ 12713176 (-) |
| G32606 | NA | non-coding | downstream | 125698 | 12600800 ~ 12655827 (-) |
| G32647 | NA | non-coding | downstream | 187503 | 12593388 ~ 12594022 (-) |
| G32285 | NA | non-coding | downstream | 307343 | 12473942 ~ 12474182 (-) |
| G32720 | NA | non-coding | upstream | 103425 | 12913214 ~ 12921534 (-) |
| G32798 | NA | non-coding | upstream | 156081 | 12965870 ~ 12966103 (-) |
| G32810 | NA | non-coding | upstream | 172667 | 12982456 ~ 12982781 (-) |
| G32822 | NA | non-coding | upstream | 189353 | 12999142 ~ 13000643 (-) |
| G32823 | NA | non-coding | upstream | 192442 | 13002231 ~ 13002542 (-) |
| G32207 | NA | other | downstream | 396745 | 12376168 ~ 12384780 (-) |
| G32150 | NA | other | downstream | 1000574 | 11776519 ~ 11780951 (-) |
| CI01000004_11407198_11412220 | ADCYAP1B, ADCYAP1 | other | downstream | 1368618 | 11406957 ~ 11412907 (-) |
| G31203 | NA | other | downstream | 2030884 | 10746437 ~ 10750641 (-) |
| G30316 | NA | other | downstream | 3374604 | 9377937 ~ 9406921 (-) |
| CI01000004_14543631_14551256 | NA | other | upstream | 1741011 | 14541515 ~ 14551352 (-) |
| G33746 | NA | other | upstream | 1759004 | 14568793 ~ 14569264 (-) |
| G33750 | NA | other | upstream | 1768669 | 14578458 ~ 14579001 (-) |
| G33755 | NA | other | upstream | 1771617 | 14581406 ~ 14581873 (-) |
| G33756 | NA | other | upstream | 1775382 | 14585171 ~ 14585745 (-) |
