trnav-cac_2


Basic Information

Item Value
gene id trnav-cac_2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 27139054 ~ 27139126 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_951
GTTTCcatagtgtagtggttatcacgttcgcctcacACTCGAAAGGTCCTCGCTTCGAAACCgggtggaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_951 True 73 tRNA 0.51 1 27139054 27139126

Neighbor

gene id symbol gene type direction distance location
trnav-aac_8 NA coding upstream 1146 27137836 ~ 27137908 (+)
trnav-aac_7 NA coding upstream 2028 27136954 ~ 27137026 (+)
trnav-aac_6 NA coding upstream 3106 27135876 ~ 27135948 (+)
trnav-aac_5 NA coding upstream 4183 27134799 ~ 27134871 (+)
trnav-aac_4 NA coding upstream 5588 27133393 ~ 27133466 (+)
trnav-aac_9 NA coding downstream 2426 27141552 ~ 27141624 (+)
LOC122342370 NA coding downstream 68610 27207736 ~ 27210602 (+)
trnav-uac_5 NA coding downstream 84788 27223914 ~ 27223986 (+)
LOC122342913 LOC107752534,LOC107665115,LOC107549827 coding downstream 280417 27419543 ~ 27436028 (+)
tcf19l LOC107752517,LOC107665168,LOC107549845,LOC107666307,LOC107753767,LOC107554348 coding downstream 297307 27436433 ~ 27442200 (+)
G31428 LOC107574244,LOC107838241 non-coding upstream 54347 27084317 ~ 27084707 (+)
trnay-gua_43 NA non-coding upstream 138199 27000769 ~ 27000855 (+)
trnar-acg_39 NA non-coding upstream 138763 27000219 ~ 27000291 (+)
trnay-gua_42 NA non-coding upstream 141182 26997786 ~ 26997872 (+)
trnae-uuc_31 NA non-coding upstream 141394 26997589 ~ 26997660 (+)
G31429 NA non-coding downstream 58761 27197887 ~ 27198266 (+)
G31438 NA non-coding downstream 93970 27233096 ~ 27233432 (+)
G31443 NA non-coding downstream 224462 27363588 ~ 27410595 (+)
LOC122343300 NA non-coding downstream 468661 27607787 ~ 27619661 (+)
G31520 NA non-coding downstream 573120 27712246 ~ 27713190 (+)
G31384 NA other upstream 1325429 25812631 ~ 25813625 (+)
G31298 LOC107569336,LOC107690089,LOC107706811,LOC107090263,LOC107391191,LOC105928559,LOC103357353 other upstream 1443673 25693802 ~ 25695381 (+)
LOC122342771 ss18l1,LOC102784650 other upstream 1450824 25635042 ~ 25688230 (+)
LOC122342408 NA other upstream 2371502 24743848 ~ 24767552 (+)
G30882 NA other upstream 2410607 24721424 ~ 24728447 (+)
LOC122342372 LOC107752513,LOC107665166,LOC107549841,LOC107753705,LOC107575738 other downstream 158410 27297536 ~ 27371196 (+)
LOC122342494 znf384,LOC107671195,LOC107582054 other downstream 217686 27356812 ~ 27358163 (+)
LOC122342806 znf384l,LOC107665159,LOC107549826,LOC108433737,LOC107554334,LOC106569967,LOC107754029,LOC107752514,LOC105892077 other downstream 221717 27360843 ~ 27406088 (+)
G31614 capn5a,capn5,LOC107665347,LOC107660684,LOC107600851,LOC106535735 other downstream 1067832 28206958 ~ 28216248 (+)
G31619 capn5,capn5a,LOC107713096,LOC107600851,LOC107660684 other downstream 1079607 28218733 ~ 28221417 (+)

Expression


Co-expression Network