G32086


Basic Information

Item Value
gene id G32086
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 162490 ~ 204536 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47337
ATATAAGactcatttttaatcttttaatttttgctttCCAAAGGTCAGTGACATTTTATGAATTTGGCATTATCCGTACAACATGTGAAGCACCTTTTTAGTTTTATGAATGCATCTTTGTGTTTCACACCTGATGAATATGGGACATTAGCGTGATAATACTTCCAGTATAAACTCAACTATGAATCTAATCATAGATGCATTTGTCCAAAATGATGATGTGTCTTGTCTAGAGATTATGGTTTTAAAGTGACCACAGTGCCTCTGTagctaattttttattttttattttttttggtttcccGCAAAGAACAGCACCTTCTTCCAGAACGGTTTCCTTTTATTATGGGCCCACATGGACCACAGGGTAAATTACTTTAACTGGCCTTGCTGATGTTAGAAGAGCCTGCTATTCCTTTTGACTGGACTTTTGTCAATCTAGCATACAGATATACGAGAGCCGTGTATCCAATGTTACTGTGAAGGCCTTTTTTGAGCACTGTGCATATCGCTAGTCCTCCAAAACCTTGTGCAGCAGTCAGAAAGACGACGTAAAACGCTTGTCACTACAGTGAGAATGGATGATGAAAGTCGACATGAAATCAAAAGCAACCCTGTTTACTTTCTTCATACGTGTTGTGatgctttatttcaattttaataggAAACTAAACGGCTATATTGCACCATCCATCCGTTTAATGGATGAAATCGAGCCcatacttacattttatttgtgttcagtATTTTGTTTCACTCTGAACCATGATAATGTGAAAGTAAAATGGGTCGCTATGCAGTTTCATGTAGACTTTGATGAGCATCAGATAGCATTCATTAAACTCTTAATGTGCCGTGTGATTGAAAGGGCATTAGAGCATTGAACATTAAGAGTGAGATTGTAAAGAAACATGAGAGAGGTCAGCATCTACTGTTGCTTAAGCTTTAAACACTACTgtgaaagattttattttgtttaaataattagttactaatatgccatttttttttttccagttatgTGTAGAGATCTTTAAAGAAGCCtactaatgtttatttttttatttgcttgtatGAATGTATAATACACAAGTCAATGTGTAtgcaatgtatttgttttttaactgtTGAAGAATATGCTTTTGAAAGCCTTAGCTTTGGATTATGGATTTTATAGCTGAGATGAGCATGTTATTAGGAGTATAAATGGAAAATGTTATAGACTGTTTTAGTAGAGGGCGGGGAAAGTGGGCCAAATCTGATCATTATTgttaaaacagacagacagagagacagagagagacacagacagagagacagagagagacacagacagagagagacacagacagacacaaaatgTCTGAGCAGGGCATTTCATTTTTCTAAATCAGATTTGAGCAACTTCTGTATGCAATTAAGATCCGATATCAGTAAGATTGTACACTACATGTATGAGGcgttaatgtaaacattttaacactgaTGTAAATAAGCTTTTCTCTTTAAGCATGAAGATCATCAGATGGGAATATTGCACCccagttaatattaaaataatattgccTTTGTATGCATGACAGGTTCCACATTCAGCATTCAGAGAGAGGAAGATGTGAACTATGAATGAGGAATATGAAATAATTCCATATAGCactaaatgagtgtgtgtgtaaacacgtGTAGAAAAAATCAAGATGTATGCAGGCATCTGAGCTTCTATTACACTATTGCTAATACACTAACAGAGTATCAACCAGTCTGTATTATTATAGACAATAAATCCTGTAAAACAAAaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatatatatatatatatatatatacttcaaattaggcttttaatgaaaatgtgacccttttctttcccttttcaGCCACATGATAATGATCCTTCAGTGAACCGTCTATGTGCTGTATGCTGTTTTGGCTTCATCTAGAAGCAAAGGGGCAATGGAAGATAAAGGAgaacacgcacacgcacacacacacacacgcacacaaaagaCTTTACAGAAAGACAGAAGCGTTAAAGCTCACTGGACACTTCAGGAAGAGTGTGAATATTAAAAAGTGCAAACAGTTTCCCTTCATTGTTCTCCTTGCTCTCAAACGTCATCAAAGATGCGTGCACGAGAAGCAGAGGTCGAGAGGTAATGTCCTCCAGC
>TU47339
ATATAAGactcatttttaatcttttaatttttgctttCCAAAGGTCAGTGACATTTTATGAATTTGGCATTATCCGTACAACATGTGAAGCACCTTTTTAGTTTTATGAATGCATCTTTGTGTTTCACACCTGATGAATATGGGACATTAGCGTGATAATACTTCCAGTATAAACTCAACTATGAATCTAATCATAGATGCATTTGTCCAAAATGATGATGTGTCTTGTCTAGAGATTATGGTTTTAAAGTGACCACAGTGCCTCTGTagctaattttttattttttattttttttggtttcccGCAAAGAACAGCACCTTCTTCCAGAACGGTTTCCTTTTATTATGGGCCCACATGGACCACAGGGTAAATTACTTTAACTGGCCTTGCTGATGTTAGAAGAGCCTGCTATTCCTTTTGACTGGACTTTTGTCAATCTAGCATACAGATATACGAGAGCCGTGTATCCAATGTTACTGTGAAGGCCTTTTTTGAGCACTGTGCATATCGCTAGTCCTCCAAAACCTTGTGCAGCAGTCAGAAAGACGACGTAAAACGCTTGTCACTACAGTGAGAATGGATGATGAAAGTCGACATGAAATCAAAAGCAACCCTGTTTACTTTCTTCATACGTGTTGTGatgctttatttcaattttaataggAAACTAAACGGCTATATTGCACCATCCATCCGTTTAATGGATGAAATCGAGCCcatacttacattttatttgtgttcagtATTTTGTTTCACTCTGAACCATGATAATGTGAAAGTAAAATGGGTCGCTATGCAGTTTCATGTAGACTTTGATGAGCATCAGATAGCATTCATTAAACTCTTAATGTGCCGTGTGATTGAAAGGGCATTAGAGCATTGAACATTAAGAGTGAGATTGTAAAGAAACATGAGAGAGGTCAGCATCTACTGTTGCTTAAGCTTTAAACACTACTgtgaaagattttattttgtttaaataattagttactaatatgccatttttttttttccagttatgTGTAGAGATCTTTAAAGAAGCCtactaatgtttatttttttatttgcttgtatGAATGTATAATACACAAGTCAATGTGTAtgcaatgtatttgttttttaactgtTGAAGAATATGCTTTTGAAAGCCTTAGCTTTGGATTATGGATTTTATAGCTGAGATGAGCATGTTATTAGGAGTATAAATGGAAAATGTTATAGACTGTTTTAGTAGAGGGCGGGGAAAGTGGGCCAAATCTGATCATTATTgttaaaacagacagacagagagacagagagagacacagacagagagacagagagagacacagacagagagagacacagacagacacaaaatgTCTGAGCAGGGCATTTCATTTTTCTAAATCAGATTTGAGCAACTTCTGTATGCAATTAAGATCCGATATCAGTAAGATTGTACACTACATGTATGAGGcgttaatgtaaacattttaacactgaTGTAAATAAGCTTTTCTCTTTAAGCATGAAGATCATCAGATGGGAATATTGCACCccagttaatattaaaataatattgccTTTGTATGCATGACAGGTTCCACATTCAGCATTCAGAGAGAGGAAGATGTGAACTATGAATGAGGAATATGAAATAATTCCATATAGCactaaatgagtgtgtgtgtaaacacgtGTAGAAAAAATCAAGATGTATGCAGGCATCTGAGCTTCTATTACACTATTGCTAATACACTAACAGAGTATCAACCAGTCTGTATTATTATAGACAATAAATCCTGTAAAACAAAaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatatatatatatatatatatatatatatatatatatatatatatatatacttcaaattaggcttttaatgaaaatgtgacccttttctttcccttttcaGCCACATGATAATGATCCTTCAGTGAACCGTCTATGTGCTGTATGCTGTTTTGGCTTCATCTAGAAGCAAAGGGGCAATGGAAGATAAAGGAgaacacgcacacgcacacacacacacacgcacacaaaagaCTTTACAGAAAGACAGAAGCGTTAAAGCTCACTGGACACTTCAGGAAGAGTGTGAATATTAAAAAGTGCAAACAGTTTCCCTTCATTGTTCTCCTTGCTCTCAAACGTCATCAAAGATGCGTGCACGAGAAGCAGAGGTCGAGAGGTAATGTCCTCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47337 True 2227 lncRNA 0.35 2 162490 204536
TU47339 False 2221 lncRNA 0.35 2 162490 204536

Neighbor

gene id symbol gene type direction distance location
LOC122346175 LOC107667871,LOC107707936,LOC107571030 coding downstream 81427 76028 ~ 81063 (-)
lifra LOC107594555,LOC107704172,LOC107658266,LOC107725078,LOC107750295,LOC107567645 coding upstream 566 205102 ~ 222554 (-)
LOC122344789 LOC107704867,LOC107594577 coding upstream 57832 262368 ~ 272815 (-)
c5h5orf34 LOC107750289,LOC107658216,LOC107567649 coding upstream 68632 273168 ~ 278284 (-)
paip1 paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649 coding upstream 74415 278951 ~ 286298 (-)
mybbp1a mybbp1a,LOC107658206,LOC107704885,LOC107594578,LOC107567654,LOC107750298 coding upstream 82597 287133 ~ 299381 (-)
G32102 NA non-coding downstream 136598 25514 ~ 25892 (-)
G32100 NA non-coding downstream 144975 16470 ~ 17515 (-)
G32099 NA non-coding downstream 147185 12703 ~ 15305 (-)
G32098 NA non-coding downstream 150621 11445 ~ 11869 (-)
G32097 NA non-coding downstream 151439 10253 ~ 11051 (-)
G32150 NA non-coding upstream 146431 350967 ~ 352079 (-)
G32177 NA non-coding upstream 227094 431630 ~ 431890 (-)
G32186 NA non-coding upstream 251581 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 253944 458480 ~ 479881 (-)
G32191 NA non-coding upstream 260528 465064 ~ 470468 (-)
G32104 LOC107725162,LOC107594575 other downstream 126142 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 127773 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 138541 20139 ~ 23949 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other upstream 35415 239951 ~ 261671 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other upstream 177516 382052 ~ 387878 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 352118 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 417978 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 1108068 1312604 ~ 1336187 (-)

Expression


Co-expression Network