Fish Transcriptome and Expression Database

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ornamental fish

G32100

Basic Information

Item	Value
gene id	G32100
gene name	NA
gene type	non-coding
species	tiger barb (Puntius tetrazona)
category of species	ornamental fish

Chromosome Information

Item	Value
chromosome id	NC_056703.1
NCBI id	CM032072.1
chromosome length	32833783
location	16470 ~ 17515 (-)
genome version	ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47355
TGGTTCCTCTCCTGGTGTTGgtctgttgttgtgtttgtctgtggTCGTACAGGAACCTGACAAGAGGATTTCCAAAAGAGTCGTTCGGCTTTCTGCATATAAAAGCACTGGACCTGGATGAGAATCTTTATGAAGCGAGTGAAAAGATCCGTACTCTGATGATAGAGGACTGCGAATGGTGTGACGTGGAGATTTTAGACGTGCAACCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU47355	True	211	lncRNA	0.46	3	16470	17515

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
LOC122346175	LOC107667871,LOC107707936,LOC107571030	coding	upstream	58513	76028 ~ 81063 (-)
LOC122345224	spef2,LOC107704166,LOC107725157,LOC107573760	coding	upstream	167823	185338 ~ 201609 (-)
lifra	LOC107594555,LOC107704172,LOC107658266,LOC107725078,LOC107750295,LOC107567645	coding	upstream	187587	205102 ~ 222554 (-)
LOC122344789	LOC107704867,LOC107594577	coding	upstream	244853	262368 ~ 272815 (-)
c5h5orf34	LOC107750289,LOC107658216,LOC107567649	coding	upstream	255653	273168 ~ 278284 (-)
G32099	NA	non-coding	downstream	1165	12703 ~ 15305 (-)
G32098	NA	non-coding	downstream	4601	11445 ~ 11869 (-)
G32097	NA	non-coding	downstream	5419	10253 ~ 11051 (-)
G32102	NA	non-coding	upstream	7999	25514 ~ 25892 (-)
G32086	NA	non-coding	upstream	144975	162490 ~ 204536 (-)
G32150	NA	non-coding	upstream	333452	350967 ~ 352079 (-)
G32177	NA	non-coding	upstream	414115	431630 ~ 431890 (-)
G32186	NA	non-coding	upstream	438602	456117 ~ 482271 (-)
G32101	LOC107594575,LOC107725162,LOC107704185	other	upstream	2624	20139 ~ 23949 (-)
G32103	LOC107725162,LOC107704185,LOC107594575	other	upstream	16264	33779 ~ 34717 (-)
G32104	LOC107725162,LOC107594575	other	upstream	18262	35777 ~ 36348 (-)
rictora	rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140	other	upstream	222436	239951 ~ 261671 (-)
kcnv2b	atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293	other	upstream	364537	382052 ~ 387878 (-)

Expression

Co-expression Network