G32150


Basic Information

Item Value
gene id G32150
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 350967 ~ 352079 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47414
TGGGGCCCTGTTGCTacggaaacaacaacaaaaaccacTGACACTATAGGACAAGGACCATCAGGTTGTTTTAGTGGAAAGGAATTATATCTATGACATTATAACAATACATAGTTGAGGGCCTGCTTGCGCTCTATAGGTTGTTTTGGGTGTAATTGAAGAGATTGTGAGTGTTTTAGTGCATTGTGTTGTTAATATGTAGCTGGAGAGATGTCTGGTTCCTCTCGTGCAGCAGAGACAGATGGGAATGAAGACTCTTATCTGAAAAGGTATTACAGAACCCTTCCGGAGGAGAAAAGATTGATGCTTGAAAAGTCTCTGATGAACGCAAATAATGATCAAGCGCAGGTCAGCGGTTTTGAGAAAGGACGCGTTGATGGTTCCAGACAAGCTCCTGGGGCCGATGCTGAAGATAACGAAGGCAAAGAATCCAAAAAATCCTCCACATGCGTTATGTTATAACATTGCTTATTATACAGAAAATCATTAAGACTTACCTCACTGATGAACACTTGCCAGTCATAATCATTTCATTCTCATTGGAAAATGCAAATGTGCGTGCCATAATGatttttaacagtattatttttattccttaaCATTGTTTAGTcgcaatatgttttttttttctccctctatttattatgattttatgtgACAACT

Function

GO:      GO:0017137

KEGG:

id description
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU47414 True 663 lncRNA 0.38 4 350967 352079

Neighbor

gene id symbol gene type direction distance location
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding downstream 11236 316841 ~ 339731 (-)
fgf10b fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653 coding downstream 37939 301638 ~ 313028 (-)
mybbp1a mybbp1a,LOC107658206,LOC107704885,LOC107594578,LOC107567654,LOC107750298 coding downstream 51586 287133 ~ 299381 (-)
paip1 paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649 coding downstream 64669 278951 ~ 286298 (-)
c5h5orf34 LOC107750289,LOC107658216,LOC107567649 coding downstream 72683 273168 ~ 278284 (-)
LOC122345880 NA coding upstream 19592 371671 ~ 372818 (-)
si:ch211-12e13.10 NA coding upstream 46340 398419 ~ 399683 (-)
lrp13 LOC107725159,LOC107594583,LOC107704910 coding upstream 47913 399992 ~ 411093 (-)
gak gak,LOC107704343,LOC107667379 coding upstream 134965 487044 ~ 511879 (-)
sh2b3 sh2b3,LOC107594562,LOC107550292,LOC107704923 coding upstream 161353 513432 ~ 549044 (-)
G32086 NA non-coding downstream 146431 162490 ~ 204536 (-)
G32102 NA non-coding downstream 325075 25514 ~ 25892 (-)
G32100 NA non-coding downstream 333452 16470 ~ 17515 (-)
G32099 NA non-coding downstream 335662 12703 ~ 15305 (-)
G32098 NA non-coding downstream 339098 11445 ~ 11869 (-)
G32177 NA non-coding upstream 79551 431630 ~ 431890 (-)
G32186 NA non-coding upstream 104038 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 106401 458480 ~ 479881 (-)
G32191 NA non-coding upstream 112985 465064 ~ 470468 (-)
G32194 LOC107667397,LOC107723313,LOC107572263,LOC107725113 non-coding upstream 113956 466035 ~ 471546 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 89296 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 314619 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 316250 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 327018 20139 ~ 23949 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other upstream 29973 382052 ~ 387878 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 204575 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 270435 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 960525 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 990527 1342606 ~ 1354414 (-)

Expression


Co-expression Network