CI01000004_13043279_13051835


Basic Information

Item Value
gene id CI01000004_13043279_13051835
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13043237 ~ 13051964 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_13043279_13051835.mRNA
ATATAAAAAGCTGTGGCTTTGACAGCTGAGGCCGTCTTTGAAATGGGCAGTGAATGTGATCTTGGATATCCTATGTTCACAGTGGCTAAGTTCCGCTCCTCTGAGGCCCACACTCTATATCAGCCAAGAGGGGTTGAGGTAGACTGTGCGCTGTGTTACCGGATGAAATTGGATTCAGATACACAACAGGACCGAGAGTTGCCAGATCTGAGGGAAGGTGGTTTTGGTGGTGGGTGGTACAGAATATGTAATATATTTGGAGTAGGCCTACTCCAGCCCACTCATCTAAGTCTTCCACTTCCTTACGGCACTAAAACTCTGGCTCAAGCCCCAGTGATTTTCACTGAACTCAGACTGATGAGTGGGTGGAGGAGACGGCAATGTCATCTCATGAACAATGTTTGATTTGACAAAACTCAGATGGATAGCTACCATACACACCACAAAAGACTCCAGGCCTCCCGCTAAGCTTACATCAATGTACCATTTTGTAAAACAAATGACTTCACATTAGAGCTATACATTACAATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_13043279_13051835.mRNA False 534 mRNA 0.45 5 13043237 13051964

Neighbor

gene id symbol gene type direction distance location
CI01000004_12984968_12997831 KISS1R, KISS1RA, GPR54 coding upstream 45174 12984968 ~ 12998063 (+)
CI01000004_12810922_12817913 VWC2L.2 coding upstream 224690 12810572 ~ 12818547 (+)
CI01000004_12764916_12775989 SLC6A9 coding upstream 267065 12764916 ~ 12776172 (+)
CI01000004_12719753_12721562 KLF17 coding upstream 321204 12718416 ~ 12722033 (+)
CI01000004_12696326_12707951 NA coding upstream 335241 12694377 ~ 12707996 (+)
CI01000004_13062721_13076100 KIF2C coding downstream 10757 13062721 ~ 13076228 (+)
CI01000004_13197104_13205895 KLHL20 coding downstream 145140 13197104 ~ 13206585 (+)
CI01000004_13211489_13233786 DARS2 coding downstream 159525 13211489 ~ 13234194 (+)
CI01000004_13467845_13475703 NA coding downstream 415881 13467845 ~ 13476204 (+)
CI01000004_13512059_13706090 ASTN1 coding downstream 460095 13512059 ~ 13706090 (+)
G32538 NA non-coding upstream 10418 13032612 ~ 13032819 (+)
G32502 NA non-coding upstream 21415 13021334 ~ 13021822 (+)
G32513 NA non-coding upstream 30477 13012527 ~ 13012760 (+)
G32506 NA non-coding upstream 41476 13001447 ~ 13001761 (+)
G32494 NA non-coding upstream 60568 12982429 ~ 12982669 (+)
G32515 NA non-coding downstream 93169 13145133 ~ 13165258 (+)
G32588 NA non-coding downstream 119384 13171348 ~ 13171675 (+)
G32591 NA non-coding downstream 126265 13178229 ~ 13178450 (+)
G32592 NA non-coding downstream 130732 13182696 ~ 13182966 (+)
G32594 NA non-coding downstream 140754 13192718 ~ 13193161 (+)
CI01000004_12646972_12652534 NA other upstream 387526 12646838 ~ 12652570 (+)
G31865 NA other upstream 848090 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 1375578 11666900 ~ 11667659 (+)
G31710 NA other upstream 1400837 11637251 ~ 11642400 (+)
G30797 NA other upstream 2545449 10497376 ~ 10497788 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 971583 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 2039280 15091200 ~ 15097173 (+)
G34220 NA other downstream 2887393 15939357 ~ 15939950 (+)
G33815 NA other downstream 3011451 16063415 ~ 16066464 (+)
G34400 NA other downstream 3925364 16971995 ~ 17025976 (+)

Expression


Co-expression Network