G32193 (LOC107594561,LOC107725071,LOC107725113,LOC107704326,LOC107723313,LOC107667397)


Basic Information

Item Value
gene id G32193
gene name LOC107594561,LOC107725071,LOC107725113,LOC107704326,LOC107723313,LOC107667397
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 477761 ~ 483409 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47485
gcatatttattatttatttagtttcaatGTCTTGAAGGAAAGTTGTAAGcctattatttttctatttgtatgACTTAAAACAGCCAGGGCAGCACTTTAACAGACAAAACTGTTATGTACAAATGTAGTGTCAAATCGTCAAACAAATTGTGACATCTTTAAACATAAATACTCAGAAATAATGCACTGACAAGACATCATAGCTACTTTTCGGTGCATGTTAAAAAAGCATCATACAGCATGTTCAGAGCAAGCAAAAAGCTTAATcattcttttttgctttttttactcTTTCCTCTAAAACAGCAGCGCATTATGAAGactttgcacattttaaagaaGACGTAGAGGACTACAGTCAGGACAGTGATGAGAAAAGCGAACACATCCAGACAGTGGTACTGGTACCAGGTAAGATTGTGGGCCTCGACACGCAGGTGTTTAGCTCCTTTATGACGCATAACAAACTCAATCCAGAACACAGCCTCATCCAAAGGCTTCACTGGTCTGTCATGATGAATCCTGGACAGACGCATAGCGTTCTCTTTATA

Function

NR:

description
PREDICTED: iroquois-class homeodomain protein IRX-5 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47485 True 551 lncRNA 0.38 2 477761 483409

Neighbor

gene id symbol gene type direction distance location
lrp13 LOC107725159,LOC107594583,LOC107704910 coding downstream 66668 399992 ~ 411093 (-)
si:ch211-12e13.10 NA coding downstream 78078 398419 ~ 399683 (-)
LOC122345880 NA coding downstream 104943 371671 ~ 372818 (-)
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding downstream 138030 316841 ~ 339731 (-)
fgf10b fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653 coding downstream 164733 301638 ~ 313028 (-)
gak gak,LOC107704343,LOC107667379 coding upstream 3635 487044 ~ 511879 (-)
sh2b3 sh2b3,LOC107594562,LOC107550292,LOC107704923 coding upstream 30023 513432 ~ 549044 (-)
pheta1 LOC107653115,LOC107725116,LOC107594559,LOC107550295,LOC107723306,LOC107687307 coding upstream 66392 549801 ~ 555622 (-)
ier3 LOC107723299,LOC107667686,LOC107653130,LOC107567455,LOC107751423,LOC107550277 coding upstream 110094 593503 ~ 594649 (-)
tor4ab LOC107653139,LOC107751425,LOC107723309,LOC107550278,LOC107567459,LOC107667676 coding upstream 122961 606370 ~ 613827 (-)
G32194 LOC107667397,LOC107723313,LOC107572263,LOC107725113 non-coding downstream 6215 466035 ~ 471546 (-)
G32191 NA non-coding downstream 7293 465064 ~ 470468 (-)
G32177 NA non-coding downstream 45871 431630 ~ 431890 (-)
G32150 NA non-coding downstream 125682 350967 ~ 352079 (-)
G32086 NA non-coding downstream 273225 162490 ~ 204536 (-)
G32201 NA non-coding upstream 1553 484962 ~ 485770 (-)
G32230 NA non-coding upstream 208009 691418 ~ 691700 (-)
G32239 NA non-coding upstream 220825 704234 ~ 704604 (-)
G32245 NA non-coding upstream 234728 718137 ~ 718410 (-)
LOC122344906 LOC107676118 non-coding upstream 336781 820190 ~ 822829 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 89883 382052 ~ 387878 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 216090 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 441413 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 443044 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 453812 20139 ~ 23949 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 73245 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 139105 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 829195 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 859197 1342606 ~ 1354414 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 1189615 1673024 ~ 1694286 (-)

Expression


Co-expression Network