G32344


Basic Information

Item Value
gene id G32344
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1299251 ~ 1301855 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47667
AGATCACTAGTTTTCTCAGTCCTCCCATTCATGTGCACTGAAGTGTTATGGACAGTGTGAGTTCATACTGACAAGCACAGGCTTGCTGCTGCGATTATGCAAGAGGTTATACCGACATGTATGTATGCACGTGTATGTGTTGTGTCTTTGTAGCTGTGGTGATGCTGGGCTTAGAAAGTCAGCGGAAAGCCTGACACATTGACCATGACATCACCGCCTGAAAGTGTGCCACCTGGGCATGATACAAGAGGTGGAAAATGCGTGTTTGCTTTCAGGGGGTGGGTATGGAGATGAGCGGGGTAAGTTCCTGGAACGGAGCTTCAGAGGAACAGAAACTGTGTGCAAGTCAGATTATCCTGGCAGCTGCAGGCGCAGAGTGCGTGTCTGAGTCAAACAAACGCTTCGGAGTGGGTTGCAAACGTTTGATTCTTCAACATTACAGAGCGACTCCTGCTGTCGCTCCGACGAATGTGTGATTGTGTACgagtgtgtacgtgtgtgtgtgttcctcagaGAGGTGACCTCATCCTAGCCCCAGTGGGCCAATGAGCTCACATTCTGCCTTCCAAGCAGCCAACCACGCAAGGCATGGTGACACGGCAcactattttgttttgtttttccccatTACTAGGTTGAACTTGCCAGTTGCACCCAGTTTGAACCGGTGCATTGAAACTGACCGAAGCTACCCGGGATTTCCTGCCTGATCACAATCTCTCTGCTACTACTACAGGGATTCAATACAGCAGTGTTAGTTTTATTTGCCTTAGGATTGATTTgaccattaaaaataatgaattacaaacagaaatgacacaaaatCTGTATATACACTCAGGAAACTATTTTATCATAAGACTATCGTGGAAAGATTAAAACATATGTTGGCTACTCTctttaaatatcattatgagCATCAGACTATCAACACTAATTTTTTTAGCACTAATAAATTTCACAGTGcaatgtgttacttttttaagCTATTATTTGGGAAACTTActagcaacttttttttttcctaaaatgtaaaacattttttgaccAAGATGCAAGTGATATTTACTGTAGGACTGTGCTTTTTTTGGCGTGGTACACTAAAGCAATAGCAATATAACACATGGAAGGTTGTTGTCTTACCCTGGACTTGAAAGCGAGGATCATTTTAGGCAGGAACAGTACGAGGCATTTGAGCTCGATGGTGAAATATTTAAGCACAAAATCGGTTATTCCAACAGCCCAGATCAGgtcaaagaaatcaaaactgtTGATGTTTGGCTTCGCAAAAATAAGGCTGTGTGAAGTTCCTCAGCGCTGAACGtgtaatacacatacacaatatTGCCAGCGAGAAACATCATAATCCAGAGAGTGGTAAACACAGACCTTTCCTCCTGAAAATACAGCCacgaacaataaaaacatacagcatGTACCAAACAGAACAATCGCTTGATTTTGATAAAACTGACAATAAAGACATATAAAATCTACTGTCTTTCTGAACTGTGTATTCATCAAAGCAGCctgaaaaaaattgttacagTTTCAATGTATTAAGCATTGCTTTTTGGAGGACCAACATAAGAAtgattcagctttgcatcacaggaataaattacaattaaacatgttttcgGATACATTACATTGCAATAATACTTcttattactgcttttactgtattttctgatATGTCATGCTTGAGGtcaaatgcaaatgtgcatAAGGGGAAATTCATGATCTGAAATCATTTAACtgtagtataaaatatttaattgtgcagGATCTCACCCGCAATGCCACCTGATGCTTCAGGGTTGAGTTAGCAAAGGCAAACGTGCTGATCATTCCAATG

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006813 potassium ion transport biological_process

KEGG:

id description
ko04010 MAPK signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU47667 True 1861 lncRNA 0.40 2 1299251 1301855

Neighbor

gene id symbol gene type direction distance location
tesca tesc,tesca,LOC107726727,LOC107667246,LOC107750755,LOC107566489 coding upstream 27994 1266077 ~ 1271257 (+)
fbxo21 fbxo21,LOC107726726,LOC107750754 coding upstream 34307 1257072 ~ 1264944 (+)
zgc:112294 zgc:112294,LOC107750763,LOC107667255,LOC107566480,LOC107599152 coding upstream 179616 1116139 ~ 1119635 (+)
scarf2 scarf2,LOC107704405,LOC107730837,LOC107566488,LOC107750756,LOC107667270,LOC107599162 coding upstream 197768 1076462 ~ 1101483 (+)
hscb LOC107704372,LOC107751426,LOC107723301,LOC107667639,LOC107550281,LOC107567452 coding upstream 633380 661601 ~ 665871 (+)
spring1 zgc:110063,LOC107667499,LOC107755806,LOC107599146,LOC107704950 coding downstream 5708 1307563 ~ 1310993 (+)
rfc5 rfc5,LOC107716544,LOC107668751,LOC107704514 coding downstream 193073 1494928 ~ 1501851 (+)
si:dkey-98f17.5 si:dkey-98f17.5,LOC107755832,LOC107599615,LOC107668759,LOC107704964,LOC108431725,LOC108255717,LOC107599159,LOC106580116 coding downstream 228906 1530761 ~ 1542384 (+)
pole pole,LOC107704563,LOC107668756 coding downstream 278068 1579923 ~ 1597728 (+)
pes pes1,pes,LOC107704970 coding downstream 301958 1603813 ~ 1612548 (+)
LOC122346206 NA non-coding upstream 5651 1289300 ~ 1293600 (+)
G32281 NA non-coding upstream 248637 1050389 ~ 1050614 (+)
G32280 NA non-coding upstream 248899 1050108 ~ 1050352 (+)
G32237 NA non-coding upstream 595063 703765 ~ 704188 (+)
G32234 NA non-coding upstream 598910 700105 ~ 700341 (+)
G32351 NA non-coding downstream 36268 1338123 ~ 1341194 (+)
G32361 lrrc74b,LOC107599620,LOC107755819,LOC107667596,LOC107599161 non-coding downstream 40673 1342528 ~ 1345039 (+)
G32390 NA non-coding downstream 109868 1411723 ~ 1418486 (+)
G32381 NA non-coding downstream 120752 1422607 ~ 1425097 (+)
G32406 NA non-coding downstream 195949 1497804 ~ 1508107 (+)
selenoe fep15,LOC107667262,LOC107566481,LOC107750764,LOC108443918,LOC101066385,LOC105931211,LOC100703742 other upstream 183846 1112264 ~ 1115405 (+)
G32277 NA other upstream 242098 1055193 ~ 1057153 (+)
tal2 tal2,LOC107594599,LOC107725114,LOC107723303,LOC107667406 other upstream 847886 450168 ~ 451365 (+)
LOC122346012 cunh9orf84,LOC107704297 other upstream 851765 432779 ~ 447486 (+)
susd1 susd1,LOC107594557,LOC107704917,LOC107572260,LOC107667560 other upstream 867786 419242 ~ 431465 (+)
ccl19a.2 ccl19a.2,LOC107704660,LOC107755825,LOC107599642,LOC107668736,LOC107599131,LOC107741495 other downstream 489973 1791828 ~ 1793266 (+)
G32611 prrc2b,LOC107704672 other downstream 520799 1822654 ~ 1826114 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other downstream 533293 1835148 ~ 1843013 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other downstream 598772 1900627 ~ 1905499 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other downstream 708362 2010217 ~ 2019150 (+)

Expression


Co-expression Network