CI01000004_13086552_13088659


Basic Information

Item Value
gene id CI01000004_13086552_13088659
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13084824 ~ 13088898 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_13086552_13088659.mRNA
AGGCAAACGTGTAGTTTACCCAAATATCATTCAGAAAGGGAATTTTGTGCGAGTGCAAAATGAGATTTTTGTTTGCTTGTTTGTTTTCTCTTTTTTTGTCATCTTGTTGGCTGCTTTGTACATTGCAAAAGCCCTGCGCAATCGTTTACCTGGTAGTTGCCCTCTGGGCTTCTCCCATAAGGCCAGTGTAGGGACAGATAAATAGCTATGGTGCTAGTCTTCCTAGTGTTCTGTCTGCAATGCAGTTCTTTCTTAGGTCCAATATTCAGCCAAAAGCTCACTCATTCAGTATTGGTCAAGTCACTGCCAGAATAAATGCAGGGAAAAGTGTTAATGCTAGTGTCCTCAGTACAATAAGCCCACCAATGGAGATGAAAGGCGTGTGCTGTAAATTCCTCGGCTTCCCACAACACGGGCTCATCTGTCAGCTTCCTCGGGCCTGTCTGAATCTGATACACCTCTGGCTTTTGAAGTTACTGTCGAGGCCCCTTAGTATCAGGACAGACAGAGAGCGGGTCAAGGGTTTTGCCTCGTGGAGTCACAGAGCAACAACTGAGGCCGTGGGGCATGATCTCGTTCTACATGTTAGAGTTTCAGTTTATCAAAAGGAACATGTTGAAAGCTTCGGCTTTGTCAAATTTGCTGATATGGAGCTGAACTGGAGTCTGTGGATTGATTGTTTGATTATGATCACCTGAGGATTTGTAGCGTTTTTATATAATCATTGAAAACAATTGTTACACTGACAAAGGCAGACAGCCGAAACATTTCTACTATTTTTATCTCCTGCTTTAACTTAATGAAACATTTTTTAGAGTGCAGACCTTTTTGCATTTTTATAACCCGGTTATAACCATAGGAAAAACCTTGATGTATGTGCGAAGTTGCAGAGAGATTGCATGAAAATGCAATTTTTTTTTTTTTTTTTAAACAAGCAGTCTCTAGATAAACTGCCAAAGATACACCAAATATCTTCACTGGAGGTCCAGAGCTATCAACAGCTTCCGCTGGGAAGCACTGAGATTAGCAGAGCTGACGTAGTTTAACTACATTTTCCTGAGGACCTCTGTGACGTACTGAACATGCTCCGAGTGAGGAAACTAGAGAGAGAGAGAGCTGATCGCAGGAGCGATAGGGCTGTCTCTCATTCATGTCTGGCTTTGGCAGCGTATCGTGAGCTGCAGGAGCCAAACGACACTGGCACTGTGCAAAACAAAATGGGGGGTCTGACTCTCTCCCTCCCATTCAGTTCTATAAACTTTATCAGCGCAGATTGAGAATGAGATTTAAAGAGAATAACAGAGCTCTGTGTGTGTGTGTGCGCTTTAACAGTTAGAGCAGTTTAGAGAGAGCTGTGCCGCAGAAATAGAGGGCAGCAGTTGGCACAAATTGAAAGAATCTTTTAAATAGTCTGTAATATACGGGTGAGATAACAGCTGACACCTTTAACAACAGATAGCTGCGTCTGGATGGCAACAATCGGAGCAAAGCAGTGTCTATATGGGGCAGGCAAACAGGAGGAGGGAAAAAATTGGGTGAGAACAAAAGAAGGAACACATGATCCGCTGTGCTGCTTGGGTGGCCAGAGGATGAGCGCTCATTGTTGCTTGAATTCAATAGGGCTGATTAGTTAAAAGTGTGTGTGTGTGCGTGCGTTACATTTATGGTGACTGGCACGGGTCTCTCCCTCTCAGCATGACTGAAAATGGGTAAAAAGATTACATTTCTATTCACTGTTTATCTCTTCTAGCCAGTATTATGGTTTTTGGAGGGTTGATGTGGCTGGAAAGGGGTGGTAGTGATAAAAATTTCATAACATAGCTGGCCTGTAAAGTTATAGGTGCCGATGTTTCTTTAGATATGGAGCCAAAACAACTCCCACAAGTTTACTTCCACATTGAAATTATTAAGAGATTAATAAGAGATAAAAAATAATAATAATAATAATATTTTTATTCAGCAAGGATGCTTTAAATTTATCAAAAGTCACAGTATAGACTTGTACATTGTTATAAAAATTTCAGTTTCAAATAAATAAATGCTGTTCTTTAGAAATTTTCGTTCATCAGAGATCATGAAAAGTTTCCACAAAAATGCATCATTGTTTTCAGGATTTATGTTAAAAAGAAATGTTTTTAAGCAACAAATCAGAATATTAAAATTTCTGAAGGATCATGTGACACTAAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCACAGGAATAAATTACATTTTATAATATATTTGAATAGAAAACAGTAATTTGATAACTTTAATAATATTCAATACAAATTTTATTTTGATTAAATAACTGCAGTATTGGTAAGCGCTTCTTTCAAAAACATAAAAAATCTTACTTGGGGTCACCGAGATTTTAAATGTATAGTGTATATATGTGTATATTTTGTTTTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_13086552_13088659.mRNA True 2426 mRNA 0.39 3 13084824 13088898

Neighbor

gene id symbol gene type direction distance location
CI01000004_12952019_12956814 ATP6V0B coding downstream 128010 12951759 ~ 12956814 (-)
CI01000004_12823734_12925962 B4GALT2 coding downstream 158862 12823734 ~ 12925962 (-)
CI01000004_12781663_12809789 NA coding downstream 275035 12781525 ~ 12809789 (-)
CI01000004_12748162_12752913 NA coding downstream 331549 12747939 ~ 12753275 (-)
CI01000004_12574165_12577698 NA coding downstream 504645 12574085 ~ 12580179 (-)
CI01000004_13094468_13114401 PTCH2 coding upstream 4688 13093586 ~ 13114998 (-)
CI01000004_13127356_13168751 EI2BG, EIF2B3 coding upstream 38458 13127356 ~ 13168751 (-)
CI01000004_13208157_13210917 CENPL coding upstream 118983 13207881 ~ 13210917 (-)
CI01000004_13354130_13419831 BRINP2 coding upstream 265232 13354130 ~ 13419831 (-)
CI01000004_13720679_13777075 PAPPA2 coding upstream 631559 13720457 ~ 13777075 (-)
G32715 NA non-coding downstream 37913 13046262 ~ 13046911 (-)
G32710 NA non-coding downstream 38661 13045819 ~ 13046163 (-)
G32823 NA non-coding downstream 82282 13002231 ~ 13002542 (-)
G32822 NA non-coding downstream 84181 12999142 ~ 13000643 (-)
G32810 NA non-coding downstream 102043 12982456 ~ 12982781 (-)
G32848 NA non-coding upstream 31338 13120236 ~ 13120630 (-)
G32849 NA non-coding upstream 34341 13123239 ~ 13140987 (-)
G32854 NA non-coding upstream 89331 13178229 ~ 13178450 (-)
G32858 NA non-coding upstream 94330 13183228 ~ 13183457 (-)
G32207 NA other downstream 700044 12376168 ~ 12384780 (-)
G32150 NA other downstream 1303873 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 1671917 11406957 ~ 11412907 (-)
G31203 NA other downstream 2334183 10746437 ~ 10750641 (-)
G30316 NA other downstream 3677903 9377937 ~ 9406921 (-)
CI01000004_14543631_14551256 NA other upstream 1461902 14541515 ~ 14551352 (-)
G33746 NA other upstream 1479895 14568793 ~ 14569264 (-)
G33750 NA other upstream 1489560 14578458 ~ 14579001 (-)
G33755 NA other upstream 1492508 14581406 ~ 14581873 (-)
G33756 NA other upstream 1496273 14585171 ~ 14585745 (-)

Expression


Co-expression Network