G32463 (LOC107599159)


Basic Information

Item Value
gene id G32463
gene name LOC107599159
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 1537398 ~ 1539368 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU47864
AACAGTCTTAAGTCTTCAGAAAACAAGAGCATACTGTGGAAAAGTTGAGCGTTTTAGCCAACCCCTCTCCAACAAGAGAGTCCAGTTCCTCTGGAGCGAAGGTGCTGATGATAAAGCTGAGGATGAAGAGCGACGGAAGGAAGACTCCCAGGACTCCACACAGGAAGGAATTAAAACGATTGCTTTTATTAGTACTCACGTTCATCCTGAGGGAAGACATGCAAAGCTGATGAATATTACATGTATGAGCTGTAGATTCATAATGCAGAGCAGATGATGTGTACCGGTCCTGTTCCAGTGTGTGGTTGATGGCAGAGATGATCAGGTTACAGTCTTTCTCCAGCTGGTCGAGTGTTTTCTGCACCGCTTGGTTTATGCTCTTCTCAATGGTCTCACAAACCTCATCAATCTGGTTGATGCATCTGCTGGgTTTTGAGGGTTGGGGATGTATATCGTGGGCATTTCGAAGCCGCATTTGTTGAGTCCAGGTCTCCTGCACAGCTCTTGGACGATCTGCATCATCACCCGCTGTGGGAATAAAACCAACACCAACACTGACTGAAACATCTGACCTTAAGATGGGTTAATGCTAAATAGGTTTAAAGTGGCAGAGAATGCCCAGAGGATTGGATTTGTAATAGCACCTGTTTGGCTTCCTGTCAGAGAACAAACTATTATGGCAGGAAGATCGGACTGTACAGATTAAAGTGAAACTGGAAATTACCATATTACCATATTAAGTCCAGACAGTTCCATGCAGATAAATATCAGTTTACTgaggtaaaatgtttttgtacatttatattgaCTTGAAGGGCAGTGAAGGTgcgcacacacacgtacacacacgtacacacacgtacacacacgcacacacacgtacacacacgtacacacacacctgtctgtcCGTTTCTCGTCCAGCCTCGTCAGCTTTGCTCAGGTAAAAGCGCAGTCTGTCTCCACACTTCTCACTCAACTTCTCAACAATGTTCAACGTACGTTTACACAATGCCTGTCCCATCGggtcaaaaaacacaaagatgaGGTCCGCCTGCTCACCTGAAATGAcgcaaatatgcaaaatgtaaagAACTGTTAATCGAATAGCTGTGTGCCTTCATTTGAGACTAATTGGTACTTTATTACTGGTACACATCGCCTCATTAGCT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107599159

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47864 True 1172 lncRNA 0.44 2 1537398 1539368

Neighbor

gene id symbol gene type direction distance location
LOC122345935 NA coding downstream 10480 1524902 ~ 1526918 (-)
LOC122346041 NA coding downstream 17532 1512140 ~ 1519866 (-)
vsig10 vsig10,LOC107704538,LOC107599650,LOC107668731,LOC107736326,LOC107716538 coding downstream 25209 1506685 ~ 1512189 (-)
wsb2 wsb2,LOC107704505,LOC107716543,LOC107668737,LOC107599617 coding downstream 31166 1501467 ~ 1506232 (-)
ksr2 ksr2,LOC107599618 coding downstream 42711 1424404 ~ 1494687 (-)
LOC122344835 aifm3,LOC107668732,LOC107716541,LOC107599649,LOC107755821,LOC107653263,LOC107599166 coding upstream 4050 1543418 ~ 1564546 (-)
cldn26 LOC107716548,LOC107653273,LOC107755822,LOC107599648,LOC107668741,LOC107576154 coding upstream 30036 1569404 ~ 1570066 (-)
lztr1 lztr1,LOC107716547,LOC107704547,LOC107755835,LOC107668721 coding upstream 32780 1572148 ~ 1579628 (-)
p2rx2 p2rx2,LOC107704555,LOC108431687 coding upstream 58479 1597847 ~ 1603060 (-)
mapk1 mapk1,LOC107741490,LOC107704570,LOC107599610,LOC107386038 coding upstream 157064 1696432 ~ 1717901 (-)
G32440 NA non-coding downstream 24086 1513045 ~ 1513312 (-)
G32409 NA non-coding downstream 245635 1289278 ~ 1291763 (-)
G32292 NA non-coding downstream 485219 1051867 ~ 1052179 (-)
G32275 NA non-coding downstream 658256 877910 ~ 879142 (-)
LOC122344906 LOC107676118 non-coding downstream 714569 820190 ~ 822829 (-)
G32462 NA non-coding upstream 1858 1541226 ~ 1567149 (-)
G32486 pes,LOC107704970,LOC107741508 non-coding upstream 67057 1606425 ~ 1607747 (-)
G32572 NA non-coding upstream 127330 1666698 ~ 1666906 (-)
G32579 NA non-coding upstream 220276 1759644 ~ 1759857 (-)
G32581 NA non-coding upstream 223110 1762478 ~ 1762829 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other downstream 182984 1342606 ~ 1354414 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other downstream 201211 1312604 ~ 1336187 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other downstream 906272 622514 ~ 631126 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other downstream 954303 556654 ~ 583095 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 1149520 382052 ~ 387878 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 133656 1673024 ~ 1694286 (-)
G32676 NA other upstream 427269 1966637 ~ 1967748 (-)
LOC122344636 pex11a,LOC107556261,LOC107714788,LOC107690406,LOC107691149,LOC107715221,LOC107551461 other upstream 480728 2020096 ~ 2022922 (-)
G32857 NA other upstream 957136 2496504 ~ 2554146 (-)
snrnp27 snrnp27 other upstream 1041180 2580548 ~ 2585452 (-)

Expression


Co-expression Network