CI01000004_13089864_13091636


Basic Information

Item Value
gene id CI01000004_13089864_13091636
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13088583 ~ 13091669 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_13089864_13091636.mRNA
AGATCTCCATGCTAGGGTTGCTCTTGAACCAACATGACTGTTAAGGGCCAGGAGGAGGGAGAGAGTAAGAGGAAGAAAAAGTTAGAAAGCAAAGGTCTGGCCTGGCCTTCCCAGTGTAAACACAAAGGTGGCGTGCCCTGGCCAGGATACTTCTTCGCAGTGTTGGCCATACTGACATTGTTGGGGATCCTGAACGGTTTGGTGCTACTTCCAGTACTGCTTTCGCTCATGGGCCCTCCAGCTGAGGTCATACCCGCTAACAACGGCAATCATTTGCAAAGTCCCTCTCCGGAGCCCATGCCTCCTCCTATGAACCACCATGGGTACTACGCTGGGCACATCCCCAAGGGACCCCGTCAGGCGTTCTCTGAGACCTCTGACTCAGAATACTATTCTGAAACTACGACAACCTCTGGCATCTGCGAGGAGGAGTACAAGTACTGTGACAGGAGCACATACATCACACCACCAGCTCAACCTCCAACCTCTCATATTCTGCTTGAAGCCAGCAAGAACCCCAGCTTCCCTAAGCTCACAGTGGTGAAACCTTTTAATGAAAGCAGCTCTAAAGGACAGAACAGTGAGTCTAAGCAGAATGCCGTCAACTCGGTCAGTTCGCAGATCACACGGTGGGACAACAAACACGAGTACCAAGGGCAGAGGAGACAACATTTACCTAGCGACAGGACCCACTGTCCTCGTAGGACTACTCAGTGTGGCCCAGGGCCACAACCAGGGAGAGGGCAGCATCAAAACAGGACTACAGCCCCAGTCCACAGCCCTGGGGCATTGCAGCGCCCTAACAATGCCATTACCATGGTTACAGCAACAGCCTCTGTGACAGTGGCAGTGCACCCCAGTTTGCCGGGGTCGTACCAGGGTTACATGCACGAGGGTTTTGAGAATAACGAGTCAGACTCTTTAGATGACTCTAAGAGGACTTCTCAAACATATGGGAAAGCTACACATTATAAGAGGGACTCTTTGGAACTTCAAGATCTGGAATCCACAGAAAAAAGCCAGCATCAAGCTAACCAGACACTAGGTGGTGCATGGATTCAAGCAGCCAAAGATTGCTAGACTGCTCCCAGCCCCCACATCCCTTTGTCTGGAATCTCTGGCTGTTTTGGGAAGTTCCCAACCCCAGCCCAGTGTCTTTTATCTCTTTGAACTGTACATAGACCTCACACAGACAAGAGGATTTATTTTAAAATTATTAAAAAGGTCTTCTTAGACATTTATAAATATATATATATATATATTTTAATACTAAAAAGAGGGAAACTATTTTAAAATGTGCTGTATAACTTGTGTATTCTCTTGTGTAAATGTCAGATGTATAGATTATAAAATGTGCTATATGTAAAAATAAGTGAAATGATATTGGTTATTGAAATGCAAGGTCAGTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGCTACTCTTCAAATTTAATATGACGTGTCTTGAAAATATGCAGTACCCCTTTCCCCAACATAAGCCAAGATTTAACTTTATATTAACAAGTTCTTAAACTGCAGCCAATAGGAAGCTTATCTGTTTTGTTCAAAGATGTTGACTTATATTTGATTGCACTGTACAAAATCAAAACCTATATAGATAACAGTTTTTCTCAGTTGAAATTTCCAGGTTTTTTCCTTTATTTATTTTACTGACAGCAACCATTGTGCCTTCTTAACTTTTAATCTTACAAAAAATAATTTGTCAAACTGTTGCATCACTATACTGTTGTCATTGATATGGACTGTTAGCCTAATGTTATCATCTGTTTTATGACTTCTCATGGTTTTACACATCCTTGTTAGCATGAAATGCTCTGTCTAGTACAGTGTGCAGTGAACAGCAGGGCTATAGGTCTAATGTTTCCTGTTACATTATTCCGTTATATACTCATTTATATACTTGAAGGGGTGGTTAAATTACTTTTGTTTGTGATTTTCCTCTATGGTTATTTTAGCCATACATGAGTAAGCTTCAGTTTGTCACTATATATGCCCCAGCAAAAGTTTGGGAGACATCAGGCAAACGTGTAGTTTACCCAAATATCATTCAGAAAGGGAATTTTGTGCGAGTGCAAAATGAGATTTTTGTTTGCTTGTTTGTTTTCTCTTTTTTTGTCATCTTGTTGGCTGCTTTGTACATTGCAAAAGCCCTGCGCAATCGTTTACCTGGTAGTTGCCCTCTGGGCTTCTCCCATAAGGCCAGTGTAGGGACAGATAAATAGCTATGGTGCTAGTCTTCCTAGTGTTCTGTCTGCAATGCAGTTCTTTCTTAGGTCCAATATTCAGCCAAAAGCTCACTCATTCAGTATTGGTCAAGTCACTGCCAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_13089864_13091636.mRNA True 2361 mRNA 0.42 4 13088583 13091669

Neighbor

gene id symbol gene type direction distance location
CI01000004_12952019_12956814 ATP6V0B coding downstream 131769 12951759 ~ 12956814 (-)
CI01000004_12823734_12925962 B4GALT2 coding downstream 162621 12823734 ~ 12925962 (-)
CI01000004_12781663_12809789 NA coding downstream 278794 12781525 ~ 12809789 (-)
CI01000004_12748162_12752913 NA coding downstream 335308 12747939 ~ 12753275 (-)
CI01000004_12574165_12577698 NA coding downstream 508404 12574085 ~ 12580179 (-)
CI01000004_13094468_13114401 PTCH2 coding upstream 1917 13093586 ~ 13114998 (-)
CI01000004_13127356_13168751 EI2BG, EIF2B3 coding upstream 35687 13127356 ~ 13168751 (-)
CI01000004_13208157_13210917 CENPL coding upstream 116212 13207881 ~ 13210917 (-)
CI01000004_13354130_13419831 BRINP2 coding upstream 262461 13354130 ~ 13419831 (-)
CI01000004_13720679_13777075 PAPPA2 coding upstream 628788 13720457 ~ 13777075 (-)
G32715 NA non-coding downstream 41672 13046262 ~ 13046911 (-)
G32710 NA non-coding downstream 42420 13045819 ~ 13046163 (-)
G32823 NA non-coding downstream 86041 13002231 ~ 13002542 (-)
G32822 NA non-coding downstream 87940 12999142 ~ 13000643 (-)
G32810 NA non-coding downstream 105802 12982456 ~ 12982781 (-)
G32848 NA non-coding upstream 28567 13120236 ~ 13120630 (-)
G32849 NA non-coding upstream 31570 13123239 ~ 13140987 (-)
G32854 NA non-coding upstream 86560 13178229 ~ 13178450 (-)
G32858 NA non-coding upstream 91559 13183228 ~ 13183457 (-)
G32207 NA other downstream 703803 12376168 ~ 12384780 (-)
G32150 NA other downstream 1307632 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 1675676 11406957 ~ 11412907 (-)
G31203 NA other downstream 2337942 10746437 ~ 10750641 (-)
G30316 NA other downstream 3681662 9377937 ~ 9406921 (-)
CI01000004_14543631_14551256 NA other upstream 1459131 14541515 ~ 14551352 (-)
G33746 NA other upstream 1477124 14568793 ~ 14569264 (-)
G33750 NA other upstream 1486789 14578458 ~ 14579001 (-)
G33755 NA other upstream 1489737 14581406 ~ 14581873 (-)
G33756 NA other upstream 1493502 14585171 ~ 14585745 (-)

Expression


Co-expression Network